Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,860,858 | G→C | 5.1% | L79L (CTC→CTG) | ligA ← | DNA ligase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,860,858 | 0 | G | C | 5.1% | 243.1 / 4.2 | 79 | L79L (CTC→CTG) | ligA | DNA ligase |
Reads supporting (aligned to +/- strand): ref base G (38/37); new base C (2/2); total (40/39) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.59e-01 |
GCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGCATCAGG > NC_002947/4860714‑4861007 | gCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCTCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCAt > 1:1008368/1‑150 (MQ=255) cGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCCAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGACTGATCGAGGCCCTCTACCACGCTACGGCCGAACTCACGCAGGGCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATgg > 2:250050/1‑150 (MQ=255) gTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATgtg < 2:167030/150‑3 (MQ=255) aCAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGt < 2:241938/150‑1 (MQ=255) cagcagGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTg < 2:184412/150‑1 (MQ=255) gcagGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTg > 1:330217/1‑148 (MQ=255) gcagGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTg < 2:330217/148‑1 (MQ=255) gcagGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGc < 1:611139/150‑1 (MQ=255) gcagGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATAGAGGCCTCCTACCGCGCCCCAGCCGTCACCCTGCACCTCCACTTATCGGAATGCGTTGCCCATACTGATCATGGGCACTTCGTGGc < 2:374690/150‑1 (MQ=255) agGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGt > 1:1070798/1‑150 (MQ=255) tCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGCCGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCt > 1:1162031/1‑150 (MQ=255) ccGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTgg < 2:214245/149‑1 (MQ=255) gccaTCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGc < 2:122002/143‑1 (MQ=255) gccaTCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGc > 1:122002/1‑143 (MQ=255) gccaTCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAAcgc > 2:715601/1‑150 (MQ=255) gccaTCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAAcgc > 1:218440/1‑150 (MQ=255) tCGGGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACgccgcc > 2:591761/1‑150 (MQ=255) gAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCaa < 2:1070798/150‑1 (MQ=255) gAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCaa > 1:359049/1‑150 (MQ=255) gAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGATTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCaa < 1:112768/150‑1 (MQ=255) gTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATg < 1:965603/107‑1 (MQ=255) gTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATg > 2:965603/1‑107 (MQ=255) gTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTc > 2:134645/1‑150 (MQ=255) gCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATggg < 1:566251/105‑1 (MQ=255) gCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATggg > 2:566251/1‑105 (MQ=255) gCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTccacccac > 1:241823/1‑150 (MQ=255) gcgcCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCAGGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGc < 1:31718/150‑1 (MQ=255) gCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCgg < 1:464875/150‑1 (MQ=255) tGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCgggg < 2:218440/150‑1 (MQ=255) gAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAAGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTAc > 2:283887/1‑150 (MQ=255) tCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGc < 2:166434/150‑1 (MQ=255) tACCACGCGACGGCCGAACTCAAGCCGGTCGGTTTCTTCGAAGGTGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCgg < 2:1008368/150‑1 (MQ=255) aCCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCggg > 1:1100351/1‑150 (MQ=255) aCCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCggg > 2:1061093/1‑150 (MQ=255) ccACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCATGCTCAGCCTGGGCaac > 2:492888/1‑66 (MQ=37) ccACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCATGCTCAGCCTGGGCaac < 1:492888/68‑3 (MQ=37) cACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGTGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGgtg > 2:618975/1‑150 (MQ=255) aCGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCgg > 1:849572/1‑146 (MQ=255) aCGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCgg < 2:849572/146‑1 (MQ=255) aCGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGgtgt > 1:1229852/1‑150 (MQ=255) cgACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCa < 1:1115448/150‑1 (MQ=255) gACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAg > 1:1039417/1‑150 (MQ=255) gCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGa < 2:1312824/117‑1 (MQ=255) gCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGa > 1:1312824/1‑117 (MQ=255) gAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGCTCAGCTTCCAg < 2:1100351/150‑1 (MQ=255) aaCTCATGCATGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAgc < 1:421227/150‑1 (MQ=255) aCTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAgcg > 1:1204020/1‑150 (MQ=255) aCTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAgcg > 1:235676/1‑150 (MQ=255) cTCACGCAGGGCGGCTTCTTCGAAGGCGTTGCCCAGGCTGTGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAgcgc < 1:618975/150‑1 (MQ=255) tCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCa < 2:1148291/138‑1 (MQ=255) tCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCa > 1:1148291/1‑138 (MQ=255) gCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGa < 2:592028/150‑1 (MQ=255) gCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGa > 1:592028/1‑150 (MQ=255) tCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCCGGTGCGGGTGTTGAGCTTCCAGGGCCTTGAGATCg > 1:198587/1‑150 (MQ=255) cGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGt < 1:1061093/150‑1 (MQ=255) cGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGt < 2:1162031/150‑1 (MQ=255) cttcttGGAGGGGGTTGCCGAGGCTGATCAGGGGGGCTTGGTGGCGTAGCTGGCTGAAGGCCGCCAAGGCAGCTCCACCCACACGCTGGGCGGGCCGGTCGGGGGGTACCACGTGCGGCGGTTGAGCTTCCAGCGCCTTGAGCTCGTGGa > 2:798386/1‑150 (MQ=255) cttcttCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGa > 2:1346269/1‑150 (MQ=255) ttcttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGa < 1:373449/96‑1 (MQ=255) ttcttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGa > 2:373449/1‑96 (MQ=255) ttcttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAg < 1:618825/125‑1 (MQ=255) ttcttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAg > 2:618825/1‑125 (MQ=255) cttcGAAGGCGTTGCCCAGGCTGCGCATGGGCACTTCGTGGCGTAGCTGGCTGTACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGTTGCGGGTGTTCAGCTTCCAGCTCCTTGAGCTCGTTGAACa < 2:326477/150‑1 (MQ=255) cttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCgg > 2:1370017/1‑99 (MQ=255) cttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCgg < 1:1370017/99‑1 (MQ=255) cttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACa < 2:1229852/150‑1 (MQ=255) ttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGt < 2:1101293/95‑1 (MQ=255) ttcGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGt > 1:1101293/1‑95 (MQ=255) cGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGc < 2:1364367/150‑1 (MQ=255) tGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCTAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTAtt < 2:241823/150‑1 (MQ=255) cccATGCTCAGCCTGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAgg < 1:920090/52‑1 (MQ=25) cccATGCTCAGCCTGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAgg > 2:920090/1‑52 (MQ=25) ccAGGCTGAGCATGGGCACTTCGTGGCGTTTCGGGCTGAACGCCGCCAAGGCAGCTCCACCCGCACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCCGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCgg > 1:398087/1‑150 (MQ=255) ccAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCtg > 2:1142223/1‑70 (MQ=255) ccAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCtg < 1:1142223/70‑1 (MQ=255) ccAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCgg > 2:682080/1‑150 (MQ=255) cAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGc > 2:628878/1‑150 (MQ=255) cTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGc > 2:46520/1‑146 (MQ=255) cTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGc < 1:46520/146‑1 (MQ=255) gAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGCATCAgg < 2:235676/150‑1 (MQ=255) | GCCGTCGCGGTACAGCAGGCTCACGGCCAGGCCATCGAGCTTGGGTTCGCAGCTGTAGTCGACCGCGCCCGGCTGATCGAGGCCTTCTACCACGCGACGGCCGAACTCACGCAGGTCGGCTTCTTCGAAGGCGTTGCCCAGGCTGAGCATGGGCACTTCGTGGCGTACCTGGCTGAACGCCGCCAAGGCAGCTCCACCCACACGCTGGGTGGGCGAGTCGGGGGTTACCAGGTGCGGGTGTTCAGCTTCCAGCGCCTTGAGCTCGTTGAACAGGCGGTCGTATTCGGCATCAGG > NC_002947/4860714‑4861007 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |