| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,876,537 | C→T | 7.5% | intergenic (+330/+107) | PP_4284 → / ← pucM | transporter/5‑hydroxyisourate hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,876,537 | 0 | C | T | 7.5% | 311.2 / 9.3 | 115 | intergenic (+330/+107) | PP_4284/pucM | transporter/5‑hydroxyisourate hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (54/51); new base T (3/6); total (57/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATC > NC_002947/4876390‑4876683 | gTAGGAGCGGGTTCTCCCCCTAAGAGGCCGGCCCTGCTGCTCAATCCCTACCCGCCGTTCCCCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCac > 2:507175‑M2/1‑148 (MQ=255)gTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCac > 1:557360‑M2/1‑148 (MQ=255) tAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCacc > 1:251765‑M2/1‑147 (MQ=255) gCGTGTTCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCacccgcga < 2:1308970‑M2/150‑9 (MQ=255) gTTTACCCGCGAAGAGGCCGGCCCCGCTGGCCAATCCCTACCCGCCGTCCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAagag < 2:482621/150‑1 (MQ=255) gTTCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAagag > 1:401097/1‑150 (MQ=255) gTTCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACACGNCNTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGCTTGGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCAGCGAagag > 1:448584/1‑150 (MQ=17) ttCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTAAACACAGCCCATCGAAGGAGCGGGGTCacccgcgaagggg < 1:114253‑M2/150‑14 (MQ=255) tCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGc < 1:1276949/150‑1 (MQ=255) tCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGc < 1:1313187/150‑1 (MQ=255) aCCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCg > 2:115201/1‑150 (MQ=255) cccGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAaga < 2:691784/144‑1 (MQ=255) cccGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAaga > 1:691784/1‑144 (MQ=255) gcgAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGTTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGcac > 1:976502/1‑150 (MQ=255) gcgAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGcac > 1:365880/1‑150 (MQ=255) cgAACAGGCCGGCCCTGCTGCCCCCTCCCCCCCCGTTGTTCTTCGTTGCCGCCACCACCGCATTCGCGCGTAAACCCGCTCCTACCTCGGGGTGGCCAGTTGGACACACCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGcaca < 2:114253/150‑1 (MQ=17) gAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTGGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAg < 1:138571/150‑1 (MQ=255) ggccggccCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACCGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAAc < 2:1357217/150‑1 (MQ=255) ggccggccCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAAc > 1:404248/1‑150 (MQ=255) cccTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGAGCAAGCCCGTCGTAGGAACGGGTTCACCCGCGAAGCGGCCGGCACAGGCAACGCcaaa > 1:375464/1‑150 (MQ=18) ccTGCTGGTCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCaaaaa > 2:648022/1‑150 (MQ=255) ctgctgGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGc < 1:809075/139‑1 (MQ=255) ctgctgGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGc > 2:809075/1‑139 (MQ=255) cctgGCCAATCCCTCCCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAAca < 2:541112/149‑1 (MQ=255) ctgGCCAATCCCACCCCCCCGTTCACCGTTGCCGCCACCACCGCATCCGCGGTTAACCCCGCTCCTCCAACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAAcag < 1:1126825/150‑1 (MQ=18) tgGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGTTAATCCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAAcagc > 1:1105388/1‑150 (MQ=255) tgGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGCAACGCAAAAAAcagc > 2:648173/1‑150 (MQ=255) gCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAAcagcag < 1:817683/150‑1 (MQ=255) ccAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGa > 1:1318486/1‑150 (MQ=255) ccAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGACGGCACAGGCAACGCAAAAAACAGCAGa < 2:1001023/150‑1 (MQ=255) cAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGAc > 2:878645/1‑150 (MQ=255) aaTCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACg > 2:1170745/1‑150 (MQ=255) tCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGaa > 2:1298088/1‑150 (MQ=255) cccTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGaaa > 2:665121/1‑150 (MQ=255) ccTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGAc < 2:1421452/145‑1 (MQ=255) ccTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGAc > 1:1421452/1‑145 (MQ=255) ccgccgTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGc < 1:1298088/150‑1 (MQ=255) ccgccgTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGc < 2:1353840/150‑1 (MQ=255) ccgccgTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCAAAGGCAACAAAAAAAACAGCAGACGAAAAAAAGc < 2:862989/150‑1 (MQ=255) gccgTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAAc < 1:873984/122‑1 (MQ=255) aCCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGaaaaaaa < 2:979723/139‑1 (MQ=255) cGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGAGGAAAAAAAGCCCGCCAGtgtg > 2:730151/1‑150 (MQ=255) gTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTga > 1:841061/1‑150 (MQ=255) gTTGCCGCCACCACCGCATGCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTga < 2:404248/150‑1 (MQ=255) ccgccACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGc > 1:444480/1‑150 (MQ=255) cgctACCAGCGGATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAACAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCg < 1:1282410/150‑1 (MQ=255) cgatccccgcattcGCGGGTAAGCCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTTacccgcgaatgcggtggtggcggcaacggtgaacggcgggtagggattggccagcagggccggcctcttcgc > 1:988220‑M2/7‑78 (MQ=255) caccacAGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGc > 2:1420725/1‑150 (MQ=255) caccGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCaa > 1:190010/1‑150 (MQ=255) accGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCaaa < 2:1183317/150‑1 (MQ=255) accGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCaaa < 1:730151/150‑1 (MQ=255) cGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCaaa < 2:517140/103‑1 (MQ=255) cGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCaaa > 1:517140/1‑103 (MQ=255) cGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAAACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAgg < 2:280566/150‑1 (MQ=255) aTTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGAcc < 2:1318486/150‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACCCCGGGGTGGCCAGTCGGACACAGCCCGTCGTAGAAGCTGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTAc < 2:337087/150‑1 (MQ=38) cgcgGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTAc > 1:161600/1‑150 (MQ=255) gggTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGaa < 2:161600/150‑1 (MQ=255) aaCCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGAttc < 2:809599/150‑1 (MQ=255) cccGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTgaga < 2:91071/122‑1 (MQ=255) cccGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTgaga > 1:91071/1‑122 (MQ=255) cccGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGAttctt < 1:1205326/150‑1 (MQ=255) accGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGAttctt > 2:957758/2‑150 (MQ=255) ccGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGAttcttc > 2:561348/1‑150 (MQ=255) gCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTa < 2:841061/150‑1 (MQ=255) cctcccgccACGGGGTGGACAGCTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCTCCAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTa < 1:522093/143‑1 (MQ=39) cTACCACGGGGTGGACAGTTGGACACAGCCCGTGGTAGGAGCGGGTTTacccgcgaatgcggtggtggcggcaacggtgaacggcgggtagggattggccagcagggccggcctcttcgcgggtgaacccgctcctacggcgggctg < 2:1347876‑M2/147‑100 (MQ=255) cTACCACGGGGTGGACAGTTGGACACAGCCCGTGGTAGGAGCGGGTTTacccgcgaatgcggtggtggcggcaacggtgaacggcgggtagggattggccagcagggccggcctcttcgcgggtgaacccgctcctacggcgggctg > 1:1347876‑M2/1‑48 (MQ=255) cTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTTacccgcgaatgcggtggtggcggcaacggtgaacggcgggtagggattggccagcagggccggcctcttcgcgggtgaacccgctcctacggcgggctgtat < 1:754652‑M2/150‑103 (MQ=255) cTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCacccgcgaatgcggtggtggcggcaacggtgaacggcggg < 1:499758‑M2/88‑41 (MQ=255) aCCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGAcc > 2:530188/1‑150 (MQ=255) ccACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCa > 2:637323/1‑150 (MQ=255) ccACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCa > 1:770326/1‑150 (MQ=255) cACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCaa > 1:381404/1‑150 (MQ=255) ccGGGGAGGACAGTTAAACACAGCCCGTCGTAGGAGTGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAAc < 2:662439/149‑1 (MQ=255) cGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACt > 2:874263/1‑150 (MQ=255) ggggTGGACAGTTGGACACAGCCCGGCGTAGGAGCGGGTTTaccctcgaatgcggtggtggcggcaacggtgaacggcgggtggggattggccagcagggccggcctcttcgcgggggaacccgcccctacggcaggctgtatccagctg < 2:987462‑M2/150‑110 (MQ=255) gggTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGAGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAg < 2:214241/150‑1 (MQ=255) ggTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTa > 2:865350/1‑137 (MQ=255) ggTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTa < 1:865350/137‑1 (MQ=255) gACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGTGAGCgg < 1:86186/106‑1 (MQ=255) gACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGTGAGCgg > 2:86186/1‑106 (MQ=255) aGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACg > 1:1160065/1‑150 (MQ=255) ttGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGAt < 1:530188/150‑1 (MQ=255) ggACACAGCCCGGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAg < 2:531199/150‑1 (MQ=255) aacaGCCCGTCGTAGGAGCGGGATACCCAGCCAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTc < 2:448584/149‑1 (MQ=255) acaGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGAAGACGAAAAAAAGCACGCCAGTGTTAGATCGGTGCAAGGTAGCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCg > 2:160648/1‑150 (MQ=38) aGCCCGTCGTAGGAGCGGGTTTacccgcgaatgcggtggtggcggcaacggtgaacggcgggtagggattggccagcagggccggcctcttcgcgggtgaacccgctcctacggcgggctgtatccaactgtccaccaccgttgtag < 1:1115817‑M2/147‑126 (MQ=255) aGCCCGTCGTAGGAGCGGGTTTacccgcgaatgcggtggtggcggcaacggtgaacggcgggtagggattggccagcagggccggcctcttcgcgggtgaacccgctcctacggcgggctgtatccaactgtccaccaccgttgtag > 2:1115817‑M2/1‑22 (MQ=255) gCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAAt > 2:449220/1‑150 (MQ=255) gCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAAt < 2:190010/150‑1 (MQ=255) cccGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCCACTAGCTTCCACGATAGGTCGAATa > 2:441726/1‑150 (MQ=255) ccGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAg < 1:1110809/150‑1 (MQ=255) gtcgtAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCt < 2:444480/150‑1 (MQ=255) tAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTAc < 1:146580/150‑1 (MQ=255) ggAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAACGCCCGCCAGGGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCCAGCGACCCACTCGCTGCGAAGAGAGGTCGAGTAGCTGTACgg > 1:315098/1‑150 (MQ=38) gAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGc > 1:655658/1‑150 (MQ=255) gCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGc < 1:569723/65‑1 (MQ=255) gCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGc > 2:569723/1‑65 (MQ=255) gTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATc > 1:76644/1‑150 (MQ=255) | GTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCGGGTAAACCCGCTCCTACCACGGGGTGGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATC > NC_002947/4876390‑4876683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |