| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 438,271 | A→G | 5.7% | L31P (CTG→CCG) ‡ | rdoA ← | serine/threonine protein kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 438,271 | 0 | A | G | 5.7% | 208.7 / 2.1 | 70 | L31P (CTG→CCG) ‡ | rdoA | serine/threonine protein kinase |
| Reads supporting (aligned to +/- strand): ref base A (32/34); new base G (2/2); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.33e-01 | |||||||||||
AGGCGTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTCGCCGCG > NC_002947/438122‑438419 | aGGCGTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGAGGTAGAACGTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCa < 2:38350/150‑1 (MQ=255) gCGTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAgg < 2:249741/150‑1 (MQ=255) ctctTCGAGGATGGCTGCATCTCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTc < 1:48218/150‑1 (MQ=255) ctctTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTc < 1:181484/150‑1 (MQ=255) ctTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCa < 2:165114/150‑1 (MQ=255) aGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCTGGGCTTTctca > 1:1088936/1‑143 (MQ=255) aGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCTGGGCTTTctca < 2:1088936/146‑4 (MQ=255) gATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTc > 2:1222474/1‑150 (MQ=255) tGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCa < 1:352313/150‑1 (MQ=255) cTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGa > 2:968269/1‑150 (MQ=255) aTCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAg > 2:67744/1‑150 (MQ=255) ccAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCACGGACCCGGGGGTTG‑GTGACAAATCCTACTCTTTCCACTGCCTCCATTACCAGGTCggg < 2:728279/150‑1 (MQ=255) cAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCgggg < 1:1222474/150‑1 (MQ=255) cAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCATCCTTCATACCCGCCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCgggg < 2:1106880/150‑1 (MQ=255) tGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCa < 2:595795/110‑1 (MQ=255) tGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCa > 1:595795/1‑110 (MQ=255) tGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGgt > 1:1203455/1‑150 (MQ=255) tGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGgt < 2:1401738/150‑1 (MQ=255) tGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCAGGGGTGAGGgt < 1:930899/150‑1 (MQ=255) gggCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGgtg > 1:1307975/1‑150 (MQ=255) ggTAGAAATTGGCAATGAACGGCTGCGCGTCGGCGATGCCCACCGGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGa > 2:1155926/1‑150 (MQ=255) gTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGaa > 2:681010/1‑150 (MQ=255) gTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGaa > 1:721998/1‑150 (MQ=255) tAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAg > 1:441172/1‑150 (MQ=255) aCTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGt < 2:721998/150‑1 (MQ=255) cTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCATGACCAGGTCGGGGGTGAGGGTGCCGAAGGGGTg < 1:983755/150‑1 (MQ=255) ttGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg < 2:278202/150‑1 (MQ=255) ttGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTgg > 2:1178859/1‑150 (MQ=255) ttGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGA‑CGCCGCCCGAGAAAGCCCAGGCTTTCCACTGCGTCCACGACAAGGTAGGGGGAGAGGGTGTAGAAGGGGTgg > 1:88401/1‑150 (MQ=255) ttCAACGGTTGCTCGTCTTCGATGCCTACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtg < 2:441172/149‑1 (MQ=255) cAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt < 1:1178859/150‑1 (MQ=255) cAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt < 1:686340/150‑1 (MQ=255) aCGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt < 1:1305248/148‑1 (MQ=255) aCGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt > 2:1305248/1‑148 (MQ=255) gCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTc < 2:1307975/150‑1 (MQ=255) ccACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCggg > 1:92074/1‑97 (MQ=255) ccACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCggg < 2:92074/97‑1 (MQ=255) aCCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAg > 1:1016788/1‑83 (MQ=255) aCCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAg < 2:1016788/83‑1 (MQ=255) aCCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTggg < 2:1203455/150‑1 (MQ=255) ccgcgGTTCTAGTAGCTGTTCAGCGCCAGCACCCGAACGTCG‑GTAAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTTGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTGAGCGGCGTGGGGCCATGGTa < 2:318521/149‑1 (MQ=255) gcgGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAgg > 2:1271660/1‑91 (MQ=255) gcgGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAgg < 1:1271660/91‑1 (MQ=255) gcgGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGt < 1:1342772/136‑1 (MQ=255) gcgGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGt > 2:1342772/1‑136 (MQ=255) tcGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTAt < 1:968269/150‑1 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAGGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCgggg > 2:823952/1‑76 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCgggg < 1:823952/76‑1 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTc < 2:710124/110‑1 (MQ=255) gTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTc > 1:710124/1‑110 (MQ=255) gCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCTAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCtg < 2:88401/150‑1 (MQ=255) cTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCtgt > 2:811761/1‑150 (MQ=255) gTTCAGCGCCCGCACCCGAGCGTCG‑CTGAGAAAGACCAGGCTCTCCACTGCGTCAACGACCAGGCGGGGGGCGAGGGTGTCGAAGGGGTGGGACATGGTGCCTCCGGAAGGTAAACGACGTGGGGCGATGGTACCGCGTTATGCCTGTGc > 2:11270/1‑150 (MQ=255) cgcCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCtt < 1:811761/150‑1 (MQ=255) gcCAGCACCCGAGTGTCG‑CTGAGACAGCCCAGGCTTTCCACTGCGTACAGGACAAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTATCTTGTTATGCCTGTGCCGGCTTc < 2:561341/150‑1 (MQ=255) gcCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTc > 1:675851/1‑150 (MQ=255) ccAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTca > 1:1064400/1‑150 (MQ=255) ccGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt > 2:1245141/1‑84 (MQ=255) ccGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtggt < 1:1245141/84‑1 (MQ=255) tCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCa > 2:78208/1‑150 (MQ=255) tGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACaggcaggc > 2:180613/1‑141 (MQ=255) tGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACaggcaggc < 1:180613/141‑1 (MQ=255) ggaAAGCCTGGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAg > 1:995382/2‑81 (MQ=255) ggaAAGCCTGGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAg < 2:995382/80‑1 (MQ=255) gaAGGCCCAGGCTTTCGACTGCGTCCAGGACCAGGTCGGGGGGGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCt > 2:19433/1‑150 (MQ=255) cccAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTcgccg > 2:148147/1‑150 (MQ=255) cccAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTcgccg > 1:988301/1‑150 (MQ=255) ccAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGa > 2:257818/1‑58 (MQ=255) ccAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGa < 1:257818/58‑1 (MQ=255) ccAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACGTGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTcgccgc > 1:1329576/1‑150 (MQ=255) ccAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtgg < 2:1399312/63‑1 (MQ=255) ccAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACAtgg > 1:1399312/1‑63 (MQ=255) cAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTCGCcgcg > 2:451067/1‑150 (MQ=255) | AGGCGTGCTCTTCGAGGATGGCTGCATCGCTCCAGCGGCCTGGGCGGTAGAACTTGGCAATCAACGGCTGCGCGTCTTCGATGCCCACCTGGTACACGCGGTTCTCGTAGCTGTTCAGCGCCAGCACCCGAGCGTCG‑CTGAGAAAGCCCAGGCTTTCCACTGCGTCCAGGACCAGGTCGGGGGTGAGGGTGTCGAAGGGGTGGGACATGGTGGCTCCGGAGGGTAAGCGGCGTGGGGCCATGGTAGCGCGTTATGCCTGTGCCGGCTTCACAGGCAGGCCCGCAATCCGCTCGCCGCG > NC_002947/438122‑438419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |