| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 444,595 | T→A | 5.8% | intergenic (+74/‑100) | bioD → / → PP_0367 | dethiobiotin synthetase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 444,595 | 0 | T | A | 5.8% | 238.0 / 3.7 | 84 | intergenic (+74/‑100) | bioD/PP_0367 | dethiobiotin synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (39/39); new base A (3/2); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
GGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGAAATC > NC_002947/444448‑444742 | ggCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTa < 1:31518/150‑1 (MQ=255) gTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTAAACCcg > 2:560183/1‑149 (MQ=255) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 1:1042002/1‑150 (MQ=255) ccAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaag > 1:331192/1‑150 (MQ=255) cAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaaga > 1:1076180/1‑150 (MQ=255) aaGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCgaagaa > 2:1154363/1‑150 (MQ=255) gCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGc > 1:833669/1‑150 (MQ=255) tCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCa < 1:1202010/150‑1 (MQ=255) gCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGc > 1:1252926/1‑150 (MQ=255) cAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAAt < 2:1185731/150‑1 (MQ=255) gTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATAc > 1:1009542/1‑150 (MQ=255) gTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATAc < 1:1330373/150‑1 (MQ=255) cGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa > 2:976108/1‑150 (MQ=255) gACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAg < 2:1076180/150‑1 (MQ=255) cATGGTGGCTGAGTATCTTCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGGGGGGAAGCCCGCCCATACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGc < 1:1167910/150‑1 (MQ=255) tGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCCGTGCAGGACTACTCGATGCCTACCAAca > 2:306246/1‑149 (MQ=38) tGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACt < 1:1250090/150‑1 (MQ=255) gAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGGAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTg < 1:1154363/150‑1 (MQ=255) aGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTgg < 2:418484/150‑1 (MQ=255) tGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa > 2:887101/1‑150 (MQ=255) gCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAg < 2:1252926/150‑1 (MQ=255) aaCTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGttt < 2:948379/95‑1 (MQ=255) aaCTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGttt > 1:948379/1‑95 (MQ=255) aaCTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGaa < 2:137270/120‑1 (MQ=255) aaCTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGaa > 1:137270/1‑120 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa > 2:1409535/1‑125 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCaa < 1:1409535/125‑1 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa > 2:195749/1‑145 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGa < 1:195749/145‑1 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCAt > 2:65431/1‑150 (MQ=255) cTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCAt < 1:65431/150‑1 (MQ=255) gATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAg < 1:1361429/150‑1 (MQ=255) aTCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAgg < 1:306246/150‑1 (MQ=255) tgctgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCCGGTTGGTAGGGCATGGCGAGCGCACGCATACCGTCGGGGGCGCGGGTTTACCCGTGAAGAAGCCAGTGCAGGAATACACAAGGCCTATCAACTGGCCTTGAGCCATTAcgggt > 1:1315582/1‑148 (MQ=255) gctgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGAtt > 2:945807/1‑150 (MQ=255) gctgGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGAtt > 1:1381258/1‑150 (MQ=255) gATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTg > 1:700286/1‑100 (MQ=255) gATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTg < 2:700286/100‑1 (MQ=255) ttAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACg < 2:759235/150‑1 (MQ=255) tAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACgg < 1:480335/150‑1 (MQ=255) gTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGc > 2:877228/1‑150 (MQ=255) gTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCACGAGTGCAGGCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGc < 2:49095/150‑1 (MQ=39) gcgaagaGGCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCtt > 2:695133/7‑150 (MQ=255) cAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGc < 2:406106/150‑1 (MQ=255) ggCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGccc < 2:1381258/150‑1 (MQ=255) ggCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGccc < 2:1042002/150‑1 (MQ=255) actggCTTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTa > 1:1197274/4‑65 (MQ=255) ccGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATGCCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTa < 1:887046/150‑1 (MQ=255) ctctTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCt > 2:1055041/1‑95 (MQ=255) ctctTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCt < 1:1055041/95‑1 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGt > 1:732655/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGtt > 2:645410/1‑149 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGtt < 1:645410/149‑1 (MQ=255) ttCGCGGGTAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAg < 2:944477/115‑1 (MQ=11) ttCGCGGGTAAACCCGCGCCCACAACGGTATGCGTTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAg > 1:944477/1‑115 (MQ=2) ggTAAACCCGCTCCTACGAGGGAAAGCACACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTg < 2:835594/150‑1 (MQ=255) gTAAACCCGCTCATCCGAGGGAACGCATAAGGGTGTGCTGGCGGGTTTAACCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgg < 2:1009542/150‑1 (MQ=255) aCCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGTGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCt > 1:1007614/1‑150 (MQ=255) cccGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCa < 1:1053900/59‑1 (MQ=255) cccGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCa > 2:1053900/1‑59 (MQ=255) tACGAGTGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGACTTAAACGGCCATTTTCGCCCCTAGCCTGGGTTAATTGGGGCGGTTGGTCAt > 2:443567/1‑150 (MQ=255) gAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTCGCCTGTTTTAATTGGGGCTGTTCGTCATCCa < 2:732655/150‑1 (MQ=255) gggAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGc < 1:887101/150‑1 (MQ=255) gAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACgg < 1:954770/100‑1 (MQ=255) gAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACgg > 2:954770/1‑100 (MQ=255) gCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAAt < 2:1315582/150‑1 (MQ=255) aTACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATgg > 1:1325999/1‑150 (MQ=255) aTACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTCAGACATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATgg > 2:1118560/1‑150 (MQ=255) tACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGa > 1:565129/1‑150 (MQ=255) aCCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgggg > 2:582931/1‑124 (MQ=255) aCCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTgggg < 1:582931/124‑1 (MQ=255) cctcgtaggCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTc > 2:1401501/8‑150 (MQ=255) cGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCt < 2:296774/124‑1 (MQ=255) cGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCt > 1:296774/1‑124 (MQ=255) cGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTc < 2:833669/150‑1 (MQ=255) gtgGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGa < 1:976108/150‑1 (MQ=255) aggCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACa < 1:1401501/149‑1 (MQ=255) ttcgcgGGTAAACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGccc < 2:23632/93‑1 (MQ=255) ttcgcgGGTAAACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGccc > 1:23632/3‑95 (MQ=38) ttcgcgGGTAAACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTa < 2:815860/96‑1 (MQ=38) ttcgcgGGTAAACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTa > 1:815860/3‑98 (MQ=38) gcgcGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATGCACTCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATg > 1:13377/1‑150 (MQ=255) gcgcGGGTTTACCCGAGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATg > 2:1166950/1‑150 (MQ=255) gggTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGaaa > 2:1259564/1‑150 (MQ=255) gggTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGCAGTCCTGACATGGaaa < 2:387534/150‑1 (MQ=255) gTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGAAATc > 1:1377383/1‑150 (MQ=255) | GGCGGGTTCCCAAGCTCAAGCAGGCCAGTGCCGACATGGTGGCTGAGCATCTGCAACTGGATCTGCTGGATTAGTCTGTTGCAGGCCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGAACGCATACCGTTGTGGGCGCGGGTTTACCCGCGAAGAAGCCAGTGCAGGAATACCCAAGGCCTATCAACTGGCATTGAGCCATTAGGGATTTAAACGGGCCTTTTCGCCCCTAGCCTGTTTTAATTGGGGCTGTTCGTCATCCAGCGTCAATGGAGTCCTGACATGGAAATC > NC_002947/444448‑444742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |