| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 459,913 | A→G | 5.8% | intergenic (‑56/+23) | pqqB ← / ← pqqA | coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 459,913 | 0 | A | G | 5.8% | 256.5 / 4.1 | 87 | intergenic (‑56/+23) | pqqB/pqqA | coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A |
| Reads supporting (aligned to +/- strand): ref base A (34/46); new base G (3/2); total (38/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.09e-01 | |||||||||||
TGCCATCACGGTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGCTACTACTTGGGTACCGC > NC_002947/459767‑460062 | tGCCATCACGGTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGCAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGc < 1:450037/150‑1 (MQ=255) cATCACGGTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGCGGCGTg > 2:324849/1‑150 (MQ=255) cATCACGGTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTg > 1:522722/1‑150 (MQ=255) cACGGTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGaaa < 1:836884/150‑1 (MQ=255) cACGGTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGaaa > 2:1023045/1‑150 (MQ=255) gTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGCTGGACATGGCGACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑t > 1:96825/1‑150 (MQ=255) aGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑Taa < 1:68484/150‑1 (MQ=255) aGCCCTTGCAGTGGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAACCGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑Taa < 2:164118/150‑1 (MQ=255) gCCCTTGCAGTTGACCCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGATACCGGATCGAAAAATCGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAg < 1:514891/150‑1 (MQ=255) cccTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATTGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACGC‑‑TAAgg > 2:12764/1‑149 (MQ=255) cccTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGc > 2:569319/1‑150 (MQ=255) cTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGt > 1:192149/1‑136 (MQ=255) cTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGt < 2:192149/136‑1 (MQ=255) cTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCt < 1:99395/150‑1 (MQ=255) ttGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCTCGGCCTGCCGGGGCGttttc > 2:86138/1‑135 (MQ=255) ttGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCTCGGCCTGCCGGGGCGttttc < 1:86138/139‑5 (MQ=255) ttGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTg > 2:1005924/1‑150 (MQ=255) tGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTgg < 2:1062403/150‑1 (MQ=255) cAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGc > 1:337308/1‑130 (MQ=255) cAGTTGACGCAGTTGCAGGTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGc < 2:337308/130‑1 (MQ=255) ggACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGc < 2:847/149‑1 (MQ=255) aCGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCgg < 1:565663/150‑1 (MQ=255) aCGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCg < 2:1184217/149‑1 (MQ=255) aCGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCg > 1:1184217/1‑149 (MQ=255) agttgcagttCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAg > 1:902339/1‑150 (MQ=255) ttgcagttCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAg > 2:254264/1‑116 (MQ=255) ttgcagttCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAg < 1:254264/116‑1 (MQ=255) gcagttCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGaa < 2:522722/150‑1 (MQ=255) gttCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTa > 2:1253370/1‑150 (MQ=255) tCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACa < 1:1224859/150‑1 (MQ=255) ccACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACAt < 1:1023045/150‑1 (MQ=255) cACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATg < 1:1276750/150‑1 (MQ=255) cTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGt > 2:857426/1‑150 (MQ=255) cTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGt < 1:415022/150‑1 (MQ=255) cGGGAACCCGCCACCGGCGGCGGCGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAACACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGAc > 2:310140/1‑150 (MQ=255) ggAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACtt < 2:931035/150‑1 (MQ=255) gctccgccgccgGTGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCg > 1:902219/4‑150 (MQ=255) aCCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCACGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGa > 1:237568/1‑150 (MQ=255) cGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGt < 1:1060527/139‑1 (MQ=255) cGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGt > 2:1060527/1‑139 (MQ=255) aCCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAACCCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGAt < 2:902339/150‑1 (MQ=255) ggcggAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAg < 1:491536/150‑1 (MQ=255) gCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAgt < 1:569319/150‑1 (MQ=255) cGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGTAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAgtgt < 2:474718/150‑1 (MQ=255) cGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAgtgt < 2:1038324/150‑1 (MQ=255) aaCCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGc > 1:412761/1‑150 (MQ=255) ccTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTgg < 1:961494/90‑1 (MQ=255) ccTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTgg > 2:961494/1‑90 (MQ=255) tGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAg < 2:1199795/148‑1 (MQ=255) tGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGt > 2:188997/1‑150 (MQ=255) tGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGCCAGTGTATGCAg > 1:1199795/1‑148 (MQ=255) ggATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGtt > 2:1354610/1‑150 (MQ=255) tGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTgg < 1:1354610/150‑1 (MQ=255) tACCTGGCCAATCTGGATGCAGAAACCGGATCGAAAAAACGAAAACGACCTGCCAGG‑TG‑CGCGCGCATCCCCGCCAACCTGGCTTACCGGGTAACGAACAACCTCTTGACTTTGATGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTc < 1:324849/150‑1 (MQ=255) aTGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCt < 1:734681/77‑1 (MQ=255) aTGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGc < 2:404526/85‑1 (MQ=255) aTGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGc > 1:404526/1‑85 (MQ=255) aTGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTAAAACCC‑‑TAAGCCt > 2:734681/1‑77 (MQ=255) cACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGtt < 1:888089/84‑1 (MQ=255) cACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGtt > 2:888089/1‑84 (MQ=255) cACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGa > 1:1398337/1‑150 (MQ=255) aTGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTcc < 1:857426/150‑1 (MQ=255) cAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTc < 1:589263/150‑1 (MQ=255) aGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGc < 2:235485/68‑1 (MQ=255) aGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGc > 1:235485/1‑68 (MQ=255) gATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCGGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAgg < 2:250912/150‑1 (MQ=255) tCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGt > 1:342310/1‑77 (MQ=255) tCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGt < 2:342310/77‑1 (MQ=255) tCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTcc > 2:132199/1‑121 (MQ=255) tCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTcc < 1:132199/121‑1 (MQ=255) tCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAgggt > 2:1071888/1‑150 (MQ=255) cGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAgggtt < 1:1048659/150‑1 (MQ=255) aaaaaCGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAgggttggg < 2:96825/150‑1 (MQ=255) aaacgaaaacgCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGa < 2:6889/140‑1 (MQ=255) aaacgaaaacgCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGa > 1:6889/1‑140 (MQ=255) aaaacgCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCa < 2:412761/150‑1 (MQ=255) aaaacgCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCa < 2:902219/150‑1 (MQ=255) acgCCTCGGCCTGCCGGGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGCTGGGTTGTTCAGct > 2:147580/1‑150 (MQ=255) gCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGctac < 2:1355406/150‑1 (MQ=255) cccGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTATCATACATAGGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGctacta > 2:969837/1‑150 (MQ=255) ggCAGGCCGAGGCGTTATACCC‑‑TAAGTCTTGCTTAGTGCTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCACTGTATTCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGCTACTACtt < 1:12764/150‑1 (MQ=255) ggCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATCGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGCTactactc < 2:237568/150‑2 (MQ=255) cAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGCTACTACTTgg < 1:1253370/150‑1 (MQ=255) ctgCCGGGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAgt < 2:299779/78‑1 (MQ=255) ctgCCGGGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAgt > 1:299779/3‑80 (MQ=255) ctgCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGATTGTTCAGCTACTACTTggg > 2:27512/3‑150 (MQ=255) ccGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCATGTCAGTGTATCAAGGTGTGGTCGACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGCTACTACTTGGATAc > 1:811010/1‑150 (MQ=255) aGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGCTACTACTTGGGTACCGc < 1:310140/150‑1 (MQ=255) | TGCCATCACGGTAGCCCTTGCAGTTGACGCAGTTGCAGTTCCACTGCGGGAACCCGCCACCGGCGGCGGAGCCGAGAACCTGGATGTACATGGCCACTCTCTATGCAGAAACCGGATCGAAAAAACGAAAACGCCCCGGCAGGCCGAGGCGTGAAACCC‑‑TAAGCCTGGCTTAGCGGTTAGCGAAGTACATGGTGACTTCGAAGCCGATACGCAGGTCAGTGTATGCAGGTTTGGTCCACATGGAATTACTCCTTCCGAATGAGGGTTGGGTTGTTCAGCTACTACTTGGGTACCGC > NC_002947/459767‑460062 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |