| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,199,728 | G→C | 8.1% | intergenic (+55/+18) | PP_4579 → / ← PP_4580 | LysR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,199,728 | 0 | G | C | 8.1% | 179.5 / 5.3 | 60 | intergenic (+55/+18) | PP_4579/PP_4580 | LysR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (27/27); new base C (3/2); total (31/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
GTGGCGTTGGTCGATGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGCCAATCGCCTCGGGTAC > NC_002947/5199581‑5199877 | gTGGCGTTGGTCGATGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCggta < 1:1191025/150‑1 (MQ=255) tGGCGTTGGTCGATGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGTCTGTAGGTGCGCGTTCGCGGGCATGCCCGCGAAAGGGCCggtac < 2:162988/150‑1 (MQ=255) tGGCGTTGGTCGATGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCggtac > 1:907325/1‑150 (MQ=255) gagTTGGTGGTTGCGGAGGCCGGGGTGTGCTGGCTGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCGTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCggtacag < 2:1373708/148‑1 (MQ=38) gTCGATGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGgtacaggtacag > 1:787363/1‑150 (MQ=255) gATGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTAcagcag > 2:965557/1‑150 (MQ=255) tGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGaa > 2:237322/1‑150 (MQ=255) gtgggtggGGTTTGCCGGCGGGTGTTGGCGCGGTATGAGGGGGATGTGGGTGGGCAGTGGATCGTGCTGGTCTGACCAACCGGCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTa < 1:1413998/150‑1 (MQ=38) gtTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAgcg > 2:354072/1‑150 (MQ=255) ttGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGAGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAgcgc > 1:1154500/1‑150 (MQ=255) gggTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCgg < 2:379769/123‑1 (MQ=255) gggTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCgg > 1:379769/1‑123 (MQ=255) gggTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACACTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCTGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAg < 1:1361045/150‑1 (MQ=255) gTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGGACAGGTACAGCAGAACTTAGCGCCAGct > 1:1062764/1‑150 (MQ=255) gCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGctctct < 1:354072/150‑1 (MQ=255) ccGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGACCGGTACAGGTACAGCAGAACTTAGCCCCAGCTCTCtt > 2:1398362/1‑150 (MQ=255) gCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGAGAGAGCCCAGTTACAGCAGAACTTAGCGCCAGCTCTCTTTca > 2:474004/1‑150 (MQ=255) ggCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTgc < 2:907325/150‑1 (MQ=255) ggCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTgc < 2:787363/150‑1 (MQ=255) gcgcGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGAGGGGCGATGGCTGGCCTACCAGCAACAATAATGGTATTGTGTCTGGTGGACTTAGCGCCAGCTCTCTTTCACCACCCTgcg > 1:1386244/1‑150 (MQ=255) tATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCACCTGTACCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCgctacaggcgga < 1:819114/107‑5 (MQ=21) tATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCACCTGTACCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCgctacaggcgga > 2:819114/1‑103 (MQ=21) tGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGccgcccgc < 1:188490/150‑1 (MQ=255) gcgGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGGCTCCGGCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGGCAGCTCTCTTTCACCACCCTGCGCCgcccgcccg > 1:506837/1‑149 (MQ=255) gggATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGCCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAgg < 1:1131125/150‑1 (MQ=255) tgggggtgggCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATca < 2:527268/147‑1 (MQ=255) ggtgggCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCAAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATcagcca < 1:683390/150‑1 (MQ=255) gtgggCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGGAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATcagccag < 1:1414162/150‑1 (MQ=255) cTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAg < 1:237322/150‑1 (MQ=255) cTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCTCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCttt < 2:1040726/150‑1 (MQ=255) aCCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCAAGACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGa > 1:1175138/1‑150 (MQ=255) aCCAACAGTCGCCGGCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGa < 2:658551/150‑1 (MQ=255) cAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTc < 2:1299386/146‑1 (MQ=255) cAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTc > 1:1299386/1‑146 (MQ=255) cAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCCCAAGGGCCGCTACAGGTACAGCAGAACTTAGCGCCACCTCTCTTTCACCACCCTGCGCCGCCCGCCCCGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGAcc > 2:50985/1‑150 (MQ=39) aaCAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACca < 2:168631/150‑1 (MQ=255) aCAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGCTACAGGTACAGCAGAACTTAGCGCCAGctctc < 2:456489/84‑1 (MQ=255) aCAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGCTACAGGTACAGCAGAACTTAGCGCCAGctctc > 1:456489/1‑84 (MQ=255) aCAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCACGAAAGGGCCGGGACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACGACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACCGGCTTTCGACcac > 2:452850/1‑150 (MQ=255) tctcCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAg > 2:612214/1‑107 (MQ=255) tctcCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAg < 1:612214/107‑1 (MQ=255) cGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCa < 1:1417299/150‑1 (MQ=255) cTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGca < 2:1154500/150‑1 (MQ=255) gCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACaaaa > 2:1414157/1‑150 (MQ=255) gCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCg < 2:472017/150‑1 (MQ=255) gCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCg > 2:390344/1‑150 (MQ=255) cTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCa > 1:768832/1‑150 (MQ=255) tttCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCAc > 1:301775/1‑150 (MQ=255) tttCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCAc > 1:230749/1‑150 (MQ=255) ttCGCGGGCATGCCCGCGAAAGGGCCGCTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATca < 1:132410/92‑1 (MQ=255) ttCGCGGGCATGCCCGCGAAAGGGCCGCTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATca > 2:132410/1‑92 (MQ=255) gggCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCtt < 2:916872/113‑1 (MQ=255) gggCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCtt > 1:916872/1‑113 (MQ=255) ggCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGa < 1:1372965/83‑1 (MQ=255) ggCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGa > 2:1372965/1‑83 (MQ=255) aTGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCa > 2:250257/1‑150 (MQ=255) tGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAg > 1:1214275/1‑150 (MQ=255) gCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGc < 1:250257/150‑1 (MQ=255) cccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGcc > 2:765256/1‑150 (MQ=255) cccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCGCTCTTTCACCACCCTGCGCCTCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGcc > 1:1397974/1‑150 (MQ=255) ccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACaaa < 2:103042/116‑1 (MQ=255) ccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACaaa > 1:103042/1‑116 (MQ=255) ccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAg < 1:358039/122‑1 (MQ=255) ccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAg > 2:358039/1‑122 (MQ=255) ccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAg < 2:571071/147‑1 (MQ=255) ccGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAg > 1:571071/1‑147 (MQ=255) gggCCGGTCCAGGTACAGCAGAACTTAGCGGCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGCCAATCGCCTc > 2:798174/1‑150 (MQ=255) gCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGCCAATCGCCTCgg < 1:1414157/150‑1 (MQ=255) gCCAGTACAGGTACAGCAGAACTTAGCGCCCGCTATCTTACACCGCCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGCCAATCGCCTCgg < 2:233888/150‑1 (MQ=255) gtacaggtacagCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGCCAATCGCCTCGGGTAc < 2:230749/150‑1 (MQ=255) gtacaggtacagCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGCCAATCGCCTCGGGTAc > 1:371643/1‑150 (MQ=255) | GTGGCGTTGGTCGATGAGGTGGTTGGGGTTTGCCGGCAGGTGTTGGCGCGGTATGCGCGGGATGTGGGTGGGCAGCGGATCGTGCTGGTCTGACCAACAGTCTCCGCCTGTAGCGGCCCTTTCGCGGGCATGCCCGCGAAAGGGCCGGTACAGGTACAGCAGAACTTAGCGCCAGCTCTCTTTCACCACCCTGCGCCGCCCGCCCAGGATCAGCCAGCCAATCCCCAGCAACAGGCTTTCGACCACAAAGGCCAGCACAAAACCGGCACCCACACCCCAGCCAATCGCCTCGGGTAC > NC_002947/5199581‑5199877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |