| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,509,497 | G→C | 10.6% | A352P (GCC→CCC) | urtA → | urea ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,509,497 | 0 | G | C | 10.6% | 254.3 / 17.3 | 85 | A352P (GCC→CCC) | urtA | urea ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (37/39); new base C (6/3); total (43/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01 | |||||||||||
GCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCA > NC_002947/5509350‑5509645 | gCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGcc > 2:640416/1‑150 (MQ=255) cTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCgg > 2:577227/1‑150 (MQ=255) cTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGAAAAGGTCACCGACCCCCTGGCCgg > 2:1148881/1‑150 (MQ=255) tACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCggg > 1:845571/1‑150 (MQ=255) cGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCCCCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCa > 2:617648/1‑150 (MQ=255) cGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCa < 2:1337930/150‑1 (MQ=255) cGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCa < 2:1337279/150‑1 (MQ=255) aaggccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGc > 2:422070/1‑150 (MQ=255) gccaaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCTCTGCCCGGCCAGTGCTTc < 2:388676/150‑1 (MQ=255) aaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAg < 1:1195059/150‑1 (MQ=255) aaggGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAg < 1:422070/150‑1 (MQ=255) cAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCgg < 2:190976/150‑1 (MQ=255) tGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCtt > 2:1297243/1‑150 (MQ=255) ggCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCTCTGCCCGGCCAGTGCtt < 2:775600/123‑1 (MQ=255) ggCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCTCTGCCCGGCCAGTGCtt > 1:775600/1‑123 (MQ=255) cGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCAt > 1:266414/1‑150 (MQ=255) gTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATg > 1:792242/1‑150 (MQ=255) aaCGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAg > 1:369348/1‑150 (MQ=255) aCGACCCCATGGAAGCCACCTACGTGGGCATCCATATCTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCCCTCAGTTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGa < 1:1384679/150‑1 (MQ=255) cccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaac < 2:1324834/150‑1 (MQ=255) cccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaac > 1:1174024/1‑150 (MQ=255) ccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCAt < 1:146644/136‑1 (MQ=255) ccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCAt > 2:146644/1‑136 (MQ=255) ccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaacc < 2:832208/150‑1 (MQ=255) ccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaac > 2:858080/1‑149 (MQ=255) ccATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGaccaac < 1:858080/149‑1 (MQ=255) ggAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATga < 1:1399215/134‑2 (MQ=255) ggAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATga > 2:1399215/1‑133 (MQ=255) aatccACCTACGTGGGCACCCACATGTGGGCCCAGCCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAACCTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAaccaccacc < 1:30939/147‑1 (MQ=255) gCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTg > 2:712281/1‑150 (MQ=255) aCCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGcac > 2:436959/1‑150 (MQ=255) aCCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGcac > 1:697089/1‑150 (MQ=255) gggCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGt < 1:617648/150‑1 (MQ=255) gCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtga < 1:1290421/150‑1 (MQ=255) tCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtgatga > 1:1066842/1‑150 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAg > 2:500210/1‑83 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAg < 1:500210/83‑1 (MQ=255) acaTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCg > 2:1357095/1‑150 (MQ=255) caTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCgg < 1:712281/150‑1 (MQ=255) aTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGc < 2:369348/150‑1 (MQ=255) aTGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGc > 2:879253/1‑150 (MQ=255) gtgGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCGGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCga < 2:358991/150‑1 (MQ=255) gggCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCgaga < 1:436959/150‑1 (MQ=255) cccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTc < 2:1066842/150‑1 (MQ=255) ccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa < 2:803659/150‑1 (MQ=255) ccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa > 2:936049/1‑150 (MQ=255) ccAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCa < 1:879253/150‑1 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtga < 2:698880/131‑1 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtga > 1:698880/1‑131 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCgg < 2:1185286/138‑1 (MQ=255) ggCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCgg > 1:1185286/1‑138 (MQ=255) gTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGAc > 1:1334801/1‑150 (MQ=255) gagaAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGc > 2:393368/1‑150 (MQ=255) gagaAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGc < 1:353547/150‑1 (MQ=255) gagaAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGc < 1:942724/150‑1 (MQ=255) agaCAGCCAAGTCCACTGACGTTGACAACGTCCGCGAAGCACTGGCCGGGCAGAGCGTCGAGGCGCCGTCGGGCTTCACCCTCACCATGGACAAGACCCACCACCACCTGCACCACCCGGTGATGATCGGCGAGGCTCAGGATGACGGcc > 2:68114/1‑150 (MQ=255) ccAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCa > 1:879543/1‑150 (MQ=255) aaGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGc < 2:1174024/150‑1 (MQ=255) aGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCg < 2:879543/150‑1 (MQ=255) tCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCgtg < 1:640416/150‑1 (MQ=255) aCTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAACGCTTAGAAGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGAGGACGGCCAGTTCAGCgtggtg > 1:958005/1‑150 (MQ=255) tGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGtgtg > 1:560394/1‑150 (MQ=255) aCGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGCCCAACCACCACCTGCACAAGCCGGtg > 1:601843/1‑104 (MQ=255) aCGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGtg < 2:601843/104‑1 (MQ=255) gTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGac > 2:808423/1‑77 (MQ=255) gTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGac < 1:808423/77‑1 (MQ=255) ttGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGaaa < 2:266414/150‑1 (MQ=255) aCAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCg > 2:1313670/1‑150 (MQ=255) cAAGGCCCGCGAAGCACTGGCCGGGCAGAGCGTCGAGTCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACATGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGa < 1:224027/150‑1 (MQ=255) aaGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGag > 2:982295/1‑150 (MQ=255) aaGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGag < 2:1334801/150‑1 (MQ=255) aaGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGACGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGag > 2:1261351/1‑150 (MQ=255) aaGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCAACTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGag < 2:697089/150‑1 (MQ=255) gcctcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGagcagc > 1:1272461/5‑150 (MQ=255) ctcgAAGCTCTGCCCGGCCAGTGCTTCGCGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGTAGCCg > 2:568193/3‑150 (MQ=255) ctcgAAGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCg > 2:281991/3‑150 (MQ=255) aaGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGc < 2:366197/113‑1 (MQ=255) aaGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGc > 1:366197/1‑113 (MQ=255) aaGCTCTGCCCGGCCAGTGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGc > 2:544253/1‑150 (MQ=255) aGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACCGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCg < 1:1357095/150‑1 (MQ=255) gCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCgg < 2:958005/150‑1 (MQ=255) cACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCga > 2:1334554/1‑94 (MQ=255) cACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCga < 1:1334554/94‑1 (MQ=255) aCTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGgc < 2:560394/150‑1 (MQ=255) aCTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGgc > 1:92294/1‑150 (MQ=255) ggCCGGGCAGAGCGTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCa < 1:509194/150‑1 (MQ=255) | GCCTACGCCAAGGCCAAGGGCCTGCCAGGTGCCGACAAGGCCGTGACCAACGACCCCATGGAAGCCACCTACGTGGGCATCCACATGTGGGCCCAGGCTGTCGAGAAAGCCAAGTCCACTGACGTTGACAAGGTCCGCGAAGCACTGGCCGGGCAGAGCTTCGAGGCGCCGTCGGGCTTCACCCTGACCATGGACAAGACCAACCACCACCTGCACAAGCCGGTGATGATCGGCGAGATTCAGGATGACGGCCAGTTCAGCGTGGTGTGGGAAACCGAGCAGCCGCTGCGGGCGCA > NC_002947/5509350‑5509645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |