| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,688,376 | A→C | 6.6% | F216V (TTC→GTC) | pilJ ← | twitching motility protein PilJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,688,376 | 0 | A | C | 6.6% | 219.5 / 5.7 | 77 | F216V (TTC→GTC) | pilJ | twitching motility protein PilJ |
| Reads supporting (aligned to +/- strand): ref base A (33/38); new base C (2/3); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
CACCGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCACCGCTCTGCAGCAGGATCTCGA > NC_002947/5688227‑5688516 | cACCGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGaa > 2:1418576/1‑150 (MQ=255) aCCGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTTGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑AACGGCCGaaa > 1:213474/1‑149 (MQ=255) aCCGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAg < 1:557148/150‑1 (MQ=255) aCCGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAg < 1:556940/150‑1 (MQ=255) aCCGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAg < 1:30289/150‑1 (MQ=255) ccGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAgg < 1:682981/150‑1 (MQ=255) ccGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAgg > 2:167957/1‑150 (MQ=255) ccGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCg < 1:1075171/150‑1 (MQ=255) cAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGACGCCTTCGgccg < 1:575968/150‑1 (MQ=255) aCGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGgccgcc > 2:1368482/1‑150 (MQ=255) aacTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCGTAGACGCGGGTGACCTGGATTGTCGCATTGCCCTTGATCGTGCTTTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTg > 1:324328/1‑150 (MQ=255) cTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTgtc < 2:1088013/150‑1 (MQ=255) tCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGggcg > 1:900528/1‑141 (MQ=255) tCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGggcg < 2:900528/141‑1 (MQ=255) tCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTgtcg > 2:5364/1‑150 (MQ=255) gCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGGCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCa > 2:125788/1‑150 (MQ=255) gcgcACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGgtgt < 2:542465/150‑1 (MQ=255) gcgcACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGgtgt > 1:638912/1‑150 (MQ=255) cgcgTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCGGTCGTCACCGGCCAGCACGGTGTTGACCGa < 2:92516/150‑1 (MQ=255) tCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCa > 2:620416/1‑150 (MQ=255) cGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCaa < 2:358007/150‑1 (MQ=255) gtcgaggACGCCGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGAt < 1:1021169/144‑1 (MQ=255) gTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGAt < 2:849528/150‑1 (MQ=255) gTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGAt < 1:620416/150‑1 (MQ=255) tCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGt > 1:494820/1‑150 (MQ=255) tCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGt > 1:1103936/1‑150 (MQ=255) gACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTc > 1:76975/1‑150 (MQ=255) aCCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAAc < 1:5364/150‑1 (MQ=255) cTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTgtc < 1:1196030/96‑1 (MQ=255) cTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTgtc > 2:1196030/1‑96 (MQ=255) cTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGc < 1:1301695/141‑1 (MQ=255) cTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAg > 1:993655/1‑150 (MQ=255) cTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGGGTTTACCGAGCCAAGGATGCGTTCGGc > 2:1301695/1‑141 (MQ=255) ggATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGaa > 2:981951/1‑67 (MQ=255) ggATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGaa < 1:981951/67‑1 (MQ=255) ggATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCt < 1:1388620/150‑1 (MQ=255) gATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTg < 1:995741/150‑1 (MQ=255) gATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTg < 1:1368482/150‑1 (MQ=255) tCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGACGCCTTCGgccgt > 2:317093/1‑72 (MQ=38) tCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGACGCCTTCGgccgt < 1:317093/73‑2 (MQ=38) gCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTgg > 2:434312/1‑150 (MQ=255) gCATTGCCATTGATCATGCCCGCCAGCACCTGGCCAAAGAGACCGGCCTGCAATGCTCTTGG‑TTTGCCGCCCGGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTgg < 1:167957/150‑1 (MQ=255) cATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTggg < 2:638912/150‑1 (MQ=255) aTTGCCATTGATCCTGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAg < 1:930945/138‑1 (MQ=255) aTTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAg > 2:930945/1‑138 (MQ=255) cATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCg > 1:1215929/1‑150 (MQ=255) ttGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCa < 2:1369364/124‑1 (MQ=255) ttGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCa > 1:1369364/1‑124 (MQ=255) ttGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTAACCTGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCa > 1:246539/1‑150 (MQ=255) tCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCt < 1:1258013/150‑1 (MQ=255) aTGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGa < 1:1297187/150‑1 (MQ=255) aTGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGa > 1:504657/1‑150 (MQ=255) tGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGAt < 1:1316682/150‑1 (MQ=255) cTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGa < 2:1084068/101‑1 (MQ=255) cTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGa > 1:1084068/1‑101 (MQ=255) tCCAGCACCTGGCCATAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGcc < 2:993655/150‑1 (MQ=255) tCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACTGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGcc > 1:879110/1‑150 (MQ=255) tCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGcc > 2:614019/1‑150 (MQ=255) ccAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCg > 2:1260796/1‑150 (MQ=255) ccAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCg < 2:879110/150‑1 (MQ=255) cAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCgg < 1:434312/150‑1 (MQ=255) aGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAATCTGATTGGCCggg < 2:324328/150‑1 (MQ=255) ccTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCAc < 1:1260796/150‑1 (MQ=255) ccTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCAc < 1:614019/150‑1 (MQ=255) cTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCAcc < 1:1124439/150‑1 (MQ=255) cTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCAcc > 2:231779/1‑150 (MQ=255) atggaaaaaGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCAcc > 2:167504/7‑150 (MQ=255) tGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGtt < 1:821071/77‑1 (MQ=255) tGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGtt > 2:821071/1‑77 (MQ=255) cAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCACCGctct > 2:376519/1‑150 (MQ=255) ccGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGtt > 1:308185/1‑65 (MQ=255) ccGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGtt < 2:308185/65‑1 (MQ=255) ccGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGc < 2:723383/128‑1 (MQ=255) ccGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGc > 1:723383/1‑128 (MQ=255) ccGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGAACCGCTCTGCAGCAgg > 2:389151/1‑150 (MQ=255) cGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCACCGct < 2:698350/139‑1 (MQ=255) cGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCACCGct > 1:698350/1‑139 (MQ=255) t‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCACCGCTCTGCAGCAGTATCTCg > 2:163404/1‑150 (MQ=255) cACGGCCGTAGGCGTGGGCCGCGTGGGCGGCGCTGTCGTTACCGGCCAGCACGGTGTCGACCAAGGCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCACCGCTCTGCAGCAGGATCTCGa < 2:268163/150‑1 (MQ=255) gcGGCCGACGCCTTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTgg > 2:653675/2‑100 (MQ=255) gcGGCCGACGCCTTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTgg < 1:653675/99‑1 (MQ=255) | CACCGAACCGGCAACGAACTGGAACAACTCGGCGATTTCGGCCAGCCGCGCACGCGCGTCGGCGTCCTCGACGCGGGTGACCTGGATTGTCGCATTGCCATTGATCATGCCCTCCAGCACCTGGCCAAAGCGCCCGGCGT‑CACGGCCGAAGGCGTCGGCCGCCTGGGCGGCGCTGTCGTCACCGGCCAGCACGGTGTTGACCGAGCCAAGGATGCGTTCGGCCAGCAACAGCTGGCGCTGGGCCACCGCAACCTGATTGGCCGGGGCACCGCTCTGCAGCAGGATCTCGA > NC_002947/5688227‑5688516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |