| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,764,854 | C→T | 10.1% | A260V (GCC→GTC) | ctpA → | carboxy‑terminal‑processing protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,764,854 | 0 | C | T | 10.1% | 183.4 / 10.6 | 69 | A260V (GCC→GTC) | ctpA | carboxy‑terminal‑processing protease |
| Reads supporting (aligned to +/- strand): ref base C (34/28); new base T (4/3); total (38/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.33e-01 | |||||||||||
CCGTATCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGG > NC_002947/5764705‑5764994 | ccGTATCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGc > 1:1026251/1‑150 (MQ=255) cGTATCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGGGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGcc < 2:63567/150‑1 (MQ=255) cGTATCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGcc > 2:166452/1‑150 (MQ=255) gTATCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCg > 2:1265323/1‑150 (MQ=255) aTCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGAc < 1:1256887/150‑1 (MQ=255) aCCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCAc > 1:561272/1‑150 (MQ=255) cccAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAACGCCCTGGCCGAGCTGCGCAAGGACAACGGCAAGCAGCTTCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACt < 1:455435/150‑1 (MQ=255) ccAGTTCCAGGTCAAGACCGGCGACGAAGTGGGCAAGTTCCTGGCCAAGCTGCGCACGGAGAACGGCAGGAAGCTGCGCGGGCTGGTACTGGACCTGCGCAACAACCCAGGCGGCGTGGTGCGATCGGCAGTGGAAGTGGCCGACCACtt > 2:309878/1‑150 (MQ=255) tCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGa > 1:10380/1‑150 (MQ=255) tCCAGGTCAAGACCGGTGACCAAGTGAGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGTTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGa < 1:1022781/150‑1 (MQ=255) cAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAgg > 2:391082/1‑150 (MQ=255) gACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGCCGTTCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCt > 1:1379704/1‑150 (MQ=255) ggTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACCACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATc < 2:1026251/150‑1 (MQ=255) tGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGt < 1:348995/150‑1 (MQ=255) aGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTacac > 1:176722/1‑150 (MQ=255) gTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa > 1:239282/1‑146 (MQ=255) gTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa < 2:239282/146‑1 (MQ=255) gCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGCGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAg > 2:925895/1‑150 (MQ=255) cAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAgg < 1:575808/150‑1 (MQ=255) cccTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGt > 1:829276/1‑125 (MQ=255) cccTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGt < 2:829276/125‑1 (MQ=255) ccTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGATGCTCGGGGTGAAGCTGGACCGGCGCAACAACCCAGGCGGCATGCTCAGACCTTCAGCGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTATACACCTAAGGCCGCAt > 1:1391009/1‑150 (MQ=255) cAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCaa > 2:922756/1‑150 (MQ=255) aGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGc < 2:561272/150‑1 (MQ=255) ggACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCg > 1:1274425/1‑150 (MQ=255) ggCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTc > 1:1004037/1‑100 (MQ=255) ggCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTc < 2:1004037/100‑1 (MQ=255) ggCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCg < 1:166452/150‑1 (MQ=255) cAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTc < 1:1083916/85‑1 (MQ=255) cAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTc > 2:1083916/1‑85 (MQ=255) aagaagCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGTCGGCCACTTccac > 2:276130/1‑85 (MQ=255) aagaagCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGTCGGCCACTTccac < 1:276130/87‑3 (MQ=255) aagaagCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCACCAACTCCGAGCTGCGTTTCTCGGcc < 1:315862/150‑1 (MQ=255) aagaagCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGCCGTGCTGCACTCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGcc > 1:683166/1‑150 (MQ=255) tGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGGCTGATCGTCTACACGAAAGGCCGCATCGCCAACTCCGAGCTGCGGTTCTCGGCCGAcccag > 2:653739/1‑148 (MQ=255) gcgcGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGGCGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGc < 2:550068/150‑1 (MQ=255) ggggTGGTGCTGGACCTGCGCAACACCCCAGGCGGCGTTCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGAt < 1:653739/150‑1 (MQ=255) ggtggtGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGc < 2:1094379/150‑1 (MQ=255) tggtgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCa < 1:391082/150‑1 (MQ=255) tgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGTCGGCCACTTccac < 1:261263/68‑3 (MQ=38) tgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGTCGGCCACTTccac > 2:261263/1‑66 (MQ=38) cTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGcgcg > 2:232361/1‑150 (MQ=255) tGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCgg < 2:176722/150‑1 (MQ=255) acaaCCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCgg > 2:1065534/4‑150 (MQ=255) aCCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCg > 1:1239966/1‑150 (MQ=255) cTGCGCAACAACCCAGGTGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTg > 1:601864/1‑150 (MQ=255) tGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGACGTGGCCCACCACTTCCTGACCCAAGGTCAGACCGTCGACACCAAAGGCAGCCAGGGCAATTCCATGCTGGGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGc > 1:1386758/1‑150 (MQ=255) caacaaCCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCt < 2:1233130/150‑1 (MQ=255) caacaaCCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCt > 1:1233130/1‑150 (MQ=255) caacCCAGGCGGCGTGCTGCACGCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggt > 2:172167/1‑150 (MQ=255) aacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGTCCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggtg > 2:1267416/1‑150 (MQ=255) acCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAg > 2:997273/1‑57 (MQ=255) acCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAg < 1:997273/57‑1 (MQ=255) ccAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTa < 2:1239966/150‑1 (MQ=255) ggcggcGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTaca > 2:26024/1‑67 (MQ=255) ggcggcGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTaca < 1:26024/67‑1 (MQ=255) gcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAg < 2:981255/89‑1 (MQ=255) gcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAg > 1:981255/1‑89 (MQ=255) tgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggt > 2:1175548/1‑133 (MQ=255) tgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggt < 1:1175548/133‑1 (MQ=255) aTCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGc > 1:666438/1‑102 (MQ=255) aTCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGc < 2:666438/102‑1 (MQ=255) ggCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGt > 2:255648/1‑117 (MQ=255) ggCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGt < 1:255648/117‑1 (MQ=255) cAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcat < 2:601864/150‑1 (MQ=255) tGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtgg > 2:1077704/1‑120 (MQ=255) tGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtgg < 1:1077704/120‑1 (MQ=255) tGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatcgg > 1:554537/1‑150 (MQ=255) tGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatcgg > 2:1073919/1‑150 (MQ=255) aggAAGTGGTCGGCCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGAc > 2:1008024/2‑89 (MQ=255) aggAAGTGGTCGGCCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGAc < 1:1008024/88‑1 (MQ=255) aggAAGTGGTCGGCCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatcgg > 1:514851/2‑150 (MQ=255) | CCGTATCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGG > NC_002947/5764705‑5764994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |