| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,835,601 | C→A | 7.6% | R111R (CGC→CGA) | PP_5114 → | adenine methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,835,601 | 0 | C | A | 7.6% | 242.5 / 4.1 | 77 | R111R (CGC→CGA) | PP_5114 | adenine methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (34/37); new base A (4/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CGCCCGCGTGCTGGACGCCTTCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGA > NC_002947/5835454‑5835747 | cgcCCGCGTGCTGGACGCCTTCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCgg < 2:945568/150‑1 (MQ=255) gcCCGCGTGCTGGACGCCTTCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCggg < 1:438188/150‑1 (MQ=255) cTGGACGCCTTCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTg < 2:805537/150‑1 (MQ=255) cTTCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGa > 1:865025/1‑150 (MQ=255) cTTCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGa > 2:72748/1‑150 (MQ=255) ttCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGAc > 1:932098/1‑150 (MQ=255) ttCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGAc > 2:395981/1‑150 (MQ=255) cACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCGGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGc > 2:463826/1‑150 (MQ=255) cACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGc < 1:81686/150‑1 (MQ=255) cGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCGCGAGGGCagcgc < 1:144576/133‑5 (MQ=255) cGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCGCGAGGGCagcgc > 2:144576/1‑129 (MQ=255) ggTAGTGGTGCCCTGGTGCGCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCCCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGcccag > 2:510278/1‑148 (MQ=255) gTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTgc < 2:932098/150‑1 (MQ=255) gtggtgCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAACTCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCt < 1:741195/150‑1 (MQ=255) tggtgCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCCCGGGCAAATCCTGCAAACCGACGCCCTGCGCTa > 2:66279/1‑150 (MQ=255) cTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCaa > 2:451181/1‑150 (MQ=255) tGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACTCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAg > 1:238943/1‑150 (MQ=255) tCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCgg < 2:32153/150‑1 (MQ=255) tCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCgg > 2:203373/1‑150 (MQ=255) gAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCgg < 2:1303680/148‑1 (MQ=255) gAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCgg > 1:1303680/1‑148 (MQ=255) gAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGcc > 1:841682/1‑150 (MQ=255) aGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCaa < 2:289131/150‑1 (MQ=255) cccTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAagc > 1:641367/1‑150 (MQ=255) ccTGTCCCGTGGGGCCGAGGACTCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAagca < 2:238943/150‑1 (MQ=255) ccTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTg > 1:296624/1‑109 (MQ=255) ccTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTg < 2:296624/109‑1 (MQ=255) cTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCaa > 2:137461/1‑135 (MQ=255) cTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCaa < 1:137461/135‑1 (MQ=255) cTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAg < 2:1381864/136‑1 (MQ=255) cTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAg > 1:1381864/1‑136 (MQ=255) tGTCCCGTGGGGCCCAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCCCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAGACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAagcagc < 1:1359209/150‑1 (MQ=255) ccGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGtt > 1:125502/1‑150 (MQ=255) ccGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGtt > 1:136438/1‑150 (MQ=255) gTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGc > 1:1202328/1‑136 (MQ=255) gTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGc < 2:1202328/136‑1 (MQ=255) ggggCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGAt > 1:1160379/1‑150 (MQ=255) gCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTc < 2:136438/150‑1 (MQ=255) cGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCg‑t < 2:679573/150‑1 (MQ=255) gAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCg‑tg < 2:1053088/150‑1 (MQ=255) gACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTc > 2:540716/1‑150 (MQ=255) gCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAAGCACGGAAAAGAAGCCCGTGGATCTCg‑tgtccgtg > 2:1014498/1‑145 (MQ=255) tGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCACTCCCGGGCAATGCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGt < 2:44707/150‑1 (MQ=255) aGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCAt < 1:400019/150‑1 (MQ=255) cAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGc < 2:1046204/100‑1 (MQ=255) cAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGc > 1:1046204/1‑100 (MQ=255) cGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACctgc < 2:641367/150‑1 (MQ=255) aTCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGcc < 2:736532/150‑1 (MQ=255) aTCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGcc < 1:203373/150‑1 (MQ=255) aTCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCCCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGcc < 1:131780/150‑1 (MQ=255) tCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCaa > 2:931583/1‑83 (MQ=255) tCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCaa < 1:931583/83‑1 (MQ=255) cAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAgcagca > 2:1423991/1‑96 (MQ=255) cAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAgcagca < 1:1423991/96‑1 (MQ=255) cTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCaa > 2:2899/1‑75 (MQ=255) cTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCaa < 1:2899/75‑1 (MQ=255) aacaacCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATg < 2:1160379/150‑1 (MQ=255) aacaacCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATg < 2:801356/150‑1 (MQ=255) caacCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCt > 1:1373456/1‑150 (MQ=255) aacCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCg‑t < 2:1260907/95‑1 (MQ=255) aacCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCg‑t > 1:1260907/1‑95 (MQ=255) ccTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGa < 1:395981/150‑1 (MQ=255) ccTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGa < 1:72748/150‑1 (MQ=255) cTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGCCGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGCCCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAg < 2:26302/150‑1 (MQ=255) cTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTTCGCGTGCTGTAGGGCCCGGGAAAGCACCAGGGGGGCGCGGCTGAGCC‑CGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTTCGGCATTCTGGAg > 1:679088/1‑150 (MQ=255) tCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGc < 2:125502/150‑1 (MQ=255) gAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAg > 2:539255/1‑150 (MQ=255) tCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATc < 1:19367/150‑1 (MQ=255) tGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGt < 1:451181/150‑1 (MQ=255) gcgcTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTg > 2:173125/1‑150 (MQ=255) atttGCCCGCGAGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTgg > 1:1328641/4‑150 (MQ=255) tttGCCCGCGAGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATTCTGGAGCAGAATCAGTGGc > 2:187298/3‑150 (MQ=255) tttGCCCGCGAGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTg > 2:1323365/3‑134 (MQ=255) tttGCCCGCGAGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTg < 1:1323365/132‑1 (MQ=255) cccTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATTAGGACCTGCTCGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTggg > 1:808372/1‑150 (MQ=255) ccTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGc > 1:260848/1‑150 (MQ=255) tCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGa > 1:661484/1‑150 (MQ=255) | CGCCCGCGTGCTGGACGCCTTCACCGGTAGTGGTGCCCTGGTGCTCGAAGCCCTGTCCCGTGGGGCCGAGGACGCCGTGGCGCTGGACAGCAACCCTGCGGCCATCGCCAACCTGAAGAACAACCTCGAAATCCTGCGCTGCCCTCGCGGGCAAATCCTGCAAACCGACGCCCTGCGCTACCTGCAAGGCCCGGCCAAGCAGCAGTTCGATGTCG‑TGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGA > NC_002947/5835454‑5835747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |