| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,840,511 | C→T | 6.8% | L42L (CTG→CTA) ‡ | sseA ← | 3‑mercaptopyruvate sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,840,511 | 0 | C | T | 6.8% | 205.9 / 4.7 | 73 | L42L (CTG→CTA) ‡ | sseA | 3‑mercaptopyruvate sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base C (30/38); new base T (2/3); total (32/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.48e-01 | |||||||||||
TCGCTGTCGTTGTTCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGATCGATGGCA > NC_002947/5840365‑5840658 | tCGCTGTCGTTGTTCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAgg < 1:1329916/150‑1 (MQ=255)tCGCTGTCGTTGTTCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAgg < 2:732090/150‑1 (MQ=255) gTCGTTGTTCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCATGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATa < 1:1183636/150‑1 (MQ=255) tCGTTGTTCAGGCCCCACTCTCGCAGGCTGTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAg > 1:38687/1‑150 (MQ=255) ttgttCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCTGGGGCATattga < 2:1032000/150‑5 (MQ=255) tgttCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCTGGGGCATattgag < 1:1286547/150‑6 (MQ=255) ttCAGGCCCCACTCTCGCAGGCGCTCGACCAGCGGCTGCGGATCGGGCAGTGGGTTGCGCACGGTGCGCGCCTTGCT‑AACGGTTAGTTGGATGTCCCTCTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCGTAGCTgcgc > 1:324507/1‑150 (MQ=255) tCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCt < 2:1076715/150‑1 (MQ=255) cAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTg > 2:648802/1‑150 (MQ=255) ggCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCTGGGGCATattgag < 2:750956/144‑6 (MQ=255) ggCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCTGGGGCATattgag > 1:750956/1‑139 (MQ=255) gCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGcc > 2:132902/1‑150 (MQ=255) gCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGcc > 1:396615/1‑150 (MQ=255) cccACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCAt > 2:1288521/1‑150 (MQ=255) ccACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGGCCCCGCAATATGCCCCAGGGCATAGCTGCGCTGGCCATa > 1:75071/1‑150 (MQ=255) cACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGTGCCCCCTCAATATGCCCCAgg > 1:1405405/1‑129 (MQ=255) cACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGTGCCCCCTCAATATGCCCCAgg < 2:1405405/129‑1 (MQ=255) ctctCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTc < 1:132902/150‑1 (MQ=255) gcTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATCGTCCACATCCTCGa > 2:1131692/1‑150 (MQ=255) gcTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGa < 1:1288521/150‑1 (MQ=255) gcTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCATCAATATGCCCCAgg < 2:1300083/116‑1 (MQ=255) gcTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCATCAATATGCCCCAgg > 1:1300083/1‑116 (MQ=255) cTCGACCGGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAg < 2:423597/150‑1 (MQ=255) aCCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCa > 1:890996/1‑150 (MQ=255) cAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCaaa < 2:650767/150‑1 (MQ=255) aGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAg < 1:415963/150‑1 (MQ=255) ccGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCg > 2:382938/1‑150 (MQ=255) cTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCa < 2:890996/150‑1 (MQ=255) tCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAgg > 1:751102/1‑150 (MQ=255) cGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGa < 1:333944/150‑1 (MQ=255) gggCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGAt < 2:1423461/150‑1 (MQ=255) ggCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATc > 1:855808/1‑150 (MQ=255) gCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAg < 2:205033/127‑1 (MQ=255) gCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAg > 1:205033/1‑127 (MQ=255) tGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTg > 2:184718/1‑150 (MQ=255) ggCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTgg < 2:809366/150‑1 (MQ=255) cccGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGa < 1:648802/150‑1 (MQ=255) ttgtcacgcCCCTTGCTCACCGGACCGCT‑GAGAACCCGGTCCCGGTCGGCAAACTGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAg > 2:438819/7‑150 (MQ=255) cGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGc < 2:183181/150‑1 (MQ=255) gTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGccc > 2:554588/1‑150 (MQ=255) cTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTc > 1:173440/1‑150 (MQ=255) ttGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCg < 2:721344/150‑1 (MQ=255) tCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCa > 2:431560/1‑150 (MQ=255) aCCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAgg > 2:591022/1‑60 (MQ=255) aCCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAgg < 1:591022/60‑1 (MQ=255) aCCGGACCGCT‑GAGATCCCGGTACAGGGCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAAc < 2:75071/150‑1 (MQ=255) cGCT‑GAGATCCCGGTCCAGGTCGGGAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCGACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCg > 2:648420/1‑150 (MQ=255) t‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTc > 1:301952/1‑73 (MQ=255) t‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTc < 2:301952/73‑1 (MQ=255) tCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATc < 1:962395/150‑1 (MQ=255) cccGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGa > 1:409134/1‑115 (MQ=255) cccGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGa < 2:409134/115‑1 (MQ=255) ccGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCaa < 1:1177849/150‑1 (MQ=255) ccGGGCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCCCCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCaa < 2:324507/150‑1 (MQ=255) cGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAAt > 1:395759/1‑150 (MQ=255) gTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGAt < 2:1381215/90‑1 (MQ=255) gTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGAt > 1:1381215/1‑90 (MQ=255) gCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGc < 1:554588/150‑1 (MQ=255) gcgcCCCCTCAATATGCCCCAAGGCATAGCTGCGCTGGCCATACTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGAGCAATTGCGCAAGGGGCATGACaa < 1:438819/150‑1 (MQ=255) cgcCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAAt < 2:173440/150‑1 (MQ=255) ccccTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAAtctc < 1:431560/150‑1 (MQ=255) cccTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTcc < 1:382938/150‑1 (MQ=255) ccTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAg > 1:6838/1‑133 (MQ=255) ccTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAg < 2:6838/133‑1 (MQ=255) ccTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCt < 2:789249/150‑1 (MQ=255) cTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGa < 1:918766/87‑1 (MQ=255) cTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGa > 2:918766/1‑87 (MQ=255) cTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTg > 1:488857/1‑150 (MQ=255) ctatGCCCTGGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGATCg > 2:346953/2‑150 (MQ=255) tatGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCGAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGATCGa < 2:395759/150‑1 (MQ=255) tatGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGGGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAggg > 1:601866/1‑129 (MQ=255) tatGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAggg < 2:601866/129‑1 (MQ=255) gCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGATCGATgg < 2:396615/150‑1 (MQ=255) cccAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGATCGATGGca > 1:1133201/1‑150 (MQ=255) ccAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGc > 1:1155066/1‑91 (MQ=255) ccAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGc < 2:1155066/91‑1 (MQ=255) ccAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGa < 1:997167/140‑1 (MQ=255) ccAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGa > 2:997167/1‑140 (MQ=255) cAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCgg < 2:554524/102‑1 (MQ=255) cAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCgg > 2:847021/1‑102 (MQ=255) cAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCgg < 1:847021/102‑1 (MQ=255) cAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCgg > 1:554524/1‑102 (MQ=255) | TCGCTGTCGTTGTTCAGGCCCCACTCTCGCAGGCGCTCGACCAGCCGCTGCGGATCGGGCAATGGGTGGCGCCCGGTGCGCCCCTTGCTCACCGGACCGCT‑GAGATCCCGGTCCAGGTCGGCAAAATGCGCCCCCTCAATATGCCCCAGGGCATAGCTGCGCTGGCCATAGTCCACATCCTCGAGGGCAAAGCGGCAGTCGAGGATCACCAACTTGGGCGAGCCCAGACGCTCGGCCAACTGCTGCGGGGTGATCAATTGCGCAAGGGGCATGACAATCTCCTGATCGATGGCA > NC_002947/5840365‑5840658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |