Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,943,898 G→C 6.7% N131K (AAC→AAG)  PP_5211 ← ChaC‑related protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,943,8980GC 6.7% 188.8 / 4.7 60N131K (AAC→AAG) PP_5211ChaC‑related protein
Reads supporting (aligned to +/- strand):  ref base G (25/31);  new base C (2/2);  total (27/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.10e-01

TGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCAGTGAGTCG  >  NC_002947/5943752‑5944042
                                                                                                                                                  |                                                                                                                                                
tgGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAACTTg                                                                                                                                               >  1:631228/1‑150 (MQ=255)
  gCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGcc                                                                                                                                             >  1:115255/1‑150 (MQ=255)
  gCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGcc                                                                                                                                             >  1:1285347/1‑150 (MQ=255)
       gCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGCCTGCGCATTGCATTCAAGATCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGTCACTGGCCAGGATCTGGCGGAGCAAGGTATCCGGCACGTTGCCGGCAt                                                                                                                                        >  2:148071/1‑150 (MQ=255)
       gCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCAt                                                                                                                                        >  2:1122193/1‑150 (MQ=255)
        ccTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAACTTGCCggatac                                                                                                                                       <  2:631228/150‑5 (MQ=255)
              tCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACgg                                                                                                                                 <  1:98662/150‑1 (MQ=255)
                     ttcAGGTTGCGATCGGGCATCTGGTGACGGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGc                                                                                                                          <  1:776475/148‑1 (MQ=255)
                             gCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAg                                                                                                                  <  1:1122193/150‑1 (MQ=255)
                                aTCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTAc                                                                                                               >  1:441343/1‑150 (MQ=255)
                                 tCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACa                                                                                                              >  1:955574/1‑150 (MQ=255)
                                    ggCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAg                                                                                                           <  2:1190657/150‑1 (MQ=255)
                                    ggCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAg                                                                                                           <  2:707078/150‑1 (MQ=255)
                                     gCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAATGCCGCGGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCGCGAGTACAAAGc                                                                                                          >  1:87183/1‑150 (MQ=255)
                                      cATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCCCCGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGcc                                                                                                         <  2:1341635/150‑1 (MQ=255)
                                      cATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGcc                                                                                                         <  1:250574/150‑1 (MQ=255)
                                          tGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAACTTGCCggatacc                                                                                                                                      >  2:366090/1‑112 (MQ=255)
                                          tGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAACTTGCCggatacc                                                                                                                                      <  1:366090/117‑6 (MQ=255)
                                           ggTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAgg                                                                                                    <  1:563983/150‑1 (MQ=255)
                                            gTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACaaa                                                                                                            <  2:160966/141‑1 (MQ=255)
                                            gTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACaaa                                                                                                            >  1:160966/1‑141 (MQ=255)
                                              gACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCt                                                                                                 <  2:64596/150‑1 (MQ=255)
                                              gACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCt                                                                                                 <  1:966139/150‑1 (MQ=255)
                                                       gTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGc                                                                                        <  1:854729/150‑1 (MQ=255)
                                                                  gTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCAccc                                                                             >  1:851552/1‑150 (MQ=255)
                                                                     tGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAgg                                                                          >  1:703501/1‑150 (MQ=255)
                                                                      gCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGc                                                                                                                                     <  1:1006388/90‑1 (MQ=255)
                                                                      gCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGc                                                                                                                                     >  2:1006388/1‑90 (MQ=255)
                                                                           aCATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAg                                                                    <  2:115255/150‑1 (MQ=255)
                                                                            cATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGt                                                                   <  2:851552/150‑1 (MQ=255)
                                                                               ccTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGa                                                                <  2:889090/149‑1 (MQ=255)
                                                                                cTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGa                                                                                                                             <  2:371917/88‑1 (MQ=255)
                                                                                cTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGa                                                                                                                             >  1:371917/1‑88 (MQ=255)
                                                                                 tCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGc                                                              >  1:507047/1‑150 (MQ=255)
                                                                                 tCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCT‑AAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGcc                                                             >  1:468622/1‑150 (MQ=255)
                                                                                   ccGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATTTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCa                                                            <  2:846635/150‑1 (MQ=255)
                                                                                   ccGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGccc                                                                                                        >  1:1359987/1‑106 (MQ=255)
                                                                                   ccGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGccc                                                                                                        <  2:1359987/106‑1 (MQ=255)
                                                                                   ccGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCa                                                            >  2:198678/1‑150 (MQ=255)
                                                                                   ccGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCa                                                            >  1:574582/1‑150 (MQ=255)
                                                                                     gcgTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGt                                                          <  2:574582/150‑1 (MQ=255)
                                                                                            gCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCg                                                   <  2:767100/150‑1 (MQ=255)
                                                                                                      cccTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGa                                         >  2:66472/1‑150 (MQ=255)
                                                                                                      cccTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGa                                         <  2:880251/150‑1 (MQ=255)
                                                                                                        cTTGGCACTGGCCAGGATCTGGGTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATa                                       <  1:557511/150‑1 (MQ=255)
                                                                                                         ttGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAg                                      >  1:359934/1‑150 (MQ=255)
                                                                                                           ggCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAggg                                    <  1:198678/150‑1 (MQ=255)
                                                                                                            gCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGc                                   <  2:703501/150‑1 (MQ=255)
                                                                                                             cACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCa                                  >  2:453910/1‑150 (MQ=255)
                                                                                                              aCTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCAt                                 >  2:535931/1‑150 (MQ=255)
                                                                                                                 ggCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCAtctc                              <  1:409144/150‑1 (MQ=255)
                                                                                                                   ccAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTcgc                            <  1:453910/150‑1 (MQ=255)
                                                                                                                             gCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAg                  <  2:1285347/150‑1 (MQ=255)
                                                                                                                                   cAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCAt            >  1:1253693/1‑150 (MQ=255)
                                                                                                                                       gTATCCGGCAAGTGGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCAGt        <  2:441343/150‑1 (MQ=255)
                                                                                                                                         aTCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCAGTGa      <  1:753572/150‑1 (MQ=255)
                                                                                                                                            cGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCAGTGAgtc   >  2:387763/1‑150 (MQ=255)
                                                                                                                                             ggCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCa          <  2:438312/142‑1 (MQ=255)
                                                                                                                                             ggCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCa          >  1:438312/1‑142 (MQ=255)
                                                                                                                                             ggCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCAGTGAgtcg  >  1:646559/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
TGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCAGGATCTGGCTGAGCAAGGTATCCGGCAAGTTGCCGGCATAGCACGGCAGATGCCGCTCCAGTACAAAGCCCAAGGCCTGCACCTTGCTACCATCACCCAGGCGGCAGTTGAGCCAGTGCGGCCGGTATGCCGGATAGGGCATCTCGCGTTGCCATAGGGCCATCAGTGAGTCG  >  NC_002947/5943752‑5944042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑