Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 535,822 | A→C | 7.6% | E85A (GAA→GCA) ‡ | rplA → | 50S ribosomal protein L1 |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 535,822 | 0 | A | C | 7.6% | 185.7 / 7.4 | 66 | E85A (GAA→GCA) ‡ | rplA | 50S ribosomal protein L1 |
Reads supporting (aligned to +/- strand): ref base A (26/35); new base C (2/3); total (28/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.15e-01 |
CAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTGGGTCCTCGCG > NC_002947/535676‑535971 | cAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAgc > 1:684740/1‑150 (MQ=255) tcgtcgAGTCCTCCGACATCGCCGTTCCCCTCGGTGTTGACCCGCGTAAATCCGCCCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGctc < 2:654945/150‑1 (MQ=255) tcgtcgAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACTGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCATCCAGGGTCCAGCAGCTGAAGCTGctc < 1:332883/150‑1 (MQ=255) cgtcgAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGctct < 1:561564/150‑1 (MQ=255) gtcgAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTTCAgctgctgga < 2:735720/150‑4 (MQ=255) gtcgAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTg > 2:857573/1‑150 (MQ=255) tcgAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCCGGTCCTGAACA‑AGCTGCTGGTGCTGCCACACGCCATTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTgg < 1:678655/150‑1 (MQ=255) cgAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGc < 2:684740/150‑1 (MQ=255) gTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGAGTCCAGCAGCTGAAGCTGCTCTGGCTGc > 2:307989/1‑150 (MQ=255) tCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATc > 2:1288545/1‑150 (MQ=255) gTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTa < 1:307989/150‑1 (MQ=255) ttAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAg < 1:1290853/150‑1 (MQ=255) ttAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAg < 2:419113/150‑1 (MQ=255) ttAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAg < 2:959463/150‑1 (MQ=255) tCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGgcgc < 2:539784/133‑1 (MQ=255) tCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGgcgc > 1:539784/1‑133 (MQ=255) cGGTGTAGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGa < 2:868727/150‑1 (MQ=255) gtTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGGACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATgg > 2:919175/1‑145 (MQ=255) gtTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATgg < 1:919175/145‑1 (MQ=255) gACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTg > 2:254152/1‑150 (MQ=255) ccGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACAAAGGGTCAAACAGATAATGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCt > 1:1387104/1‑150 (MQ=255) aTCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTAt > 1:1364188/1‑129 (MQ=255) aTCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTAt < 2:1364188/129‑1 (MQ=255) aTCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGGATGGACGATCTGGCTGCCGAAAt < 2:590451/150‑1 (MQ=255) tCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATg > 2:1273721/1‑150 (MQ=255) ccAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAgg > 2:561191/1‑150 (MQ=255) cAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAggc < 1:1273721/150‑1 (MQ=255) tacgtaGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGAcc > 1:500752/1‑150 (MQ=255) cgtaGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTg < 1:254152/150‑1 (MQ=255) gtaGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGa > 1:179355/1‑150 (MQ=255) taGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGaa > 2:814901/1‑150 (MQ=255) gcTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTAt > 2:567911/1‑150 (MQ=255) gcTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTAt < 1:1288545/150‑1 (MQ=255) gcTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTAt < 2:1310256/150‑1 (MQ=255) gcTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTAt > 2:983453/1‑150 (MQ=255) cTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATg > 1:1141627/1‑150 (MQ=255) tAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGaa < 1:338888/70‑1 (MQ=255) tAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGaa > 2:338888/1‑70 (MQ=255) gcCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTat > 1:282968/1‑150 (MQ=255) ccACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTatc < 1:561191/150‑1 (MQ=255) ccACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTatc < 2:179355/150‑1 (MQ=255) acGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGgcgc > 2:1321938/1‑76 (MQ=255) acGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGgcgc < 1:1321938/76‑1 (MQ=255) cgcgTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTCATCGCATCGCCTGATGCCATGCGCGtt < 2:1141627/150‑1 (MQ=255) gcgTTGCTGTCTTCACCCAGGGTACAGCAGCTGAAGCTGCCCTGGCTGCCGGCGCTGATCGCGTAGGTATGGCCGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATAACGTCGTTCTCGCATCGCCTGATGCCATGCGCGTTg > 2:551675/1‑150 (MQ=255) cgTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGt < 1:1066720/150‑1 (MQ=255) gTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTa < 1:857573/150‑1 (MQ=255) ttGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAg < 2:975215/150‑1 (MQ=255) gCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGTCCTATACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTATGt < 2:1267276/150‑1 (MQ=255) ttCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTg > 1:563253/1‑150 (MQ=255) aCCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGaa < 2:321395/95‑1 (MQ=255) aCCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGaa > 1:321395/1‑95 (MQ=255) aCCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGt > 2:2979/1‑150 (MQ=255) aCCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGt < 2:1408365/150‑1 (MQ=255) cccAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTat > 2:846914/1‑109 (MQ=255) cccAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGAGCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTat < 1:846914/109‑1 (MQ=255) tCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATNGCATCGNCTGATGCCATGCNCGTTGTAGGTCAGCTGGGTCAGGTTCt < 1:983453/150‑1 (MQ=255) cagagcagcTTCAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATgc < 2:4839/119‑1 (MQ=255) cagagcagcTTCAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATgc > 1:4839/4‑122 (MQ=255) agagcagcTTCAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTg < 1:1265937/148‑1 (MQ=255) agagcagcTTCAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTg > 2:1265937/3‑150 (MQ=255) cagcagCTGAAGCTGCTTTGGCTGCCGGCGCCGATCACGTAGGTTTGCACGATCTTGCTGCCGAAATGAAAGGCGGCGACCTGAGCTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTgg < 2:447733/150‑1 (MQ=255) cagcagCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAg < 1:1205686/143‑1 (MQ=255) cagcagCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAg > 2:1205686/1‑143 (MQ=255) cagcagCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTgg < 1:814901/150‑1 (MQ=255) aagcagcTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTgg < 1:567911/149‑1 (MQ=255) agcagcTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATgcgc < 1:285965/121‑1 (MQ=255) agcagcTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATgcgc > 2:285965/1‑121 (MQ=255) aaGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTGGGTCCTcgcg < 2:563253/150‑1 (MQ=255) | CAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTAC‑CGTGCTGCCACACGGCACTGGCAAGACCGTTCGCGTTGCTGTCTTCACCCAGGGTCCAGCAGCTGAAGCTGCTCTGGCTGCCGGCGCTGATCGCGTAGGTATGGACGATCTGGCTGCCGAAATGAAAGGCGGCGACCTGAACTATGACGTCGTTATCGCATCGCCTGATGCCATGCGCGTTGTAGGTCAGCTGGGTCAGGTTCTGGGTCCTCGCG > NC_002947/535676‑535971 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |