Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,982,858 | C→G | 7.3% | G1149G (GGC→GGG) | PP_5242 → | GAF domain‑containing sensor histidine kinase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,982,858 | 0 | C | G | 7.3% | 170.8 / 4.9 | 55 | G1149G (GGC→GGG) | PP_5242 | GAF domain‑containing sensor histidine kinase |
Reads supporting (aligned to +/- strand): ref base C (27/24); new base G (2/2); total (29/26) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.08e-01 |
AACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATCCACGAGCAGGCGCTG > NC_002947/5982709‑5983005 | aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCTGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc < 2:126450/150‑1 (MQ=255) aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc < 1:482417/150‑1 (MQ=255) aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc < 2:1277800/150‑1 (MQ=255) aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc < 2:432774/150‑1 (MQ=255) aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc > 1:432774/1‑150 (MQ=255) aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTGGTCTACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGc < 1:175602/150‑1 (MQ=255) aacaCCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACAGCCGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCATGCGAGAGGGATTCAGCCGCTGGGCAGGc > 2:621743/1‑150 (MQ=255) cacCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCtt < 1:1209863/150‑1 (MQ=255) cacCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCtt < 2:285433/150‑1 (MQ=255) acCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTc > 1:483869/1‑150 (MQ=255) cACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCa > 2:1201916/1‑150 (MQ=255) gcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGGTTGAAGCCGGcccagcg > 1:809660/1‑142 (MQ=255) gcACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGGTTGAAGCCGGcccagcg < 2:809660/147‑6 (MQ=255) aTCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCAACTTCCgcagc > 1:84276/1‑150 (MQ=255) aTCAACCTGACCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCgcagc > 2:1137464/1‑150 (MQ=255) cAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCagcaa < 2:1133241/150‑1 (MQ=255) cTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAg > 1:15532/1‑150 (MQ=255) tGGTCGACTATCACCTGTTAAGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCAACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGt > 2:213734/1‑150 (MQ=255) tCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGc > 2:853003/1‑120 (MQ=255) tCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGc < 1:853003/120‑1 (MQ=255) tCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGa > 2:627140/1‑150 (MQ=255) tCACCTGTTCCGCGGCATGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGa > 2:1417222/1‑150 (MQ=255) ccTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAAt > 1:1277680/1‑144 (MQ=255) ccTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAAt < 2:1277680/144‑1 (MQ=255) ccTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCAACTTCCGCAGCAAGCAGTTGCTAATCGAggg < 2:84276/150‑1 (MQ=255) cTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGc < 1:266526/150‑1 (MQ=255) cTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGc < 1:1417222/150‑1 (MQ=255) ttCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTg > 1:514988/1‑150 (MQ=255) gCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTTATCGCCAAGCTc < 2:15532/150‑1 (MQ=255) cTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGaa < 2:20805/150‑1 (MQ=255) gCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCg < 1:1201916/150‑1 (MQ=255) gCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACg < 1:1137464/150‑1 (MQ=255) ccccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACgg > 2:39012/1‑150 (MQ=255) cccGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCCGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGc < 2:1342975/150‑1 (MQ=255) gCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGc < 2:535269/125‑1 (MQ=255) gCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGc > 1:535269/1‑125 (MQ=255) cccACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCcg > 2:774840/1‑150 (MQ=255) cGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGGCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGa > 2:1023829/1‑150 (MQ=255) cGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTTCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGGTCGAAGGCGACTGCCTGTCCGCGATCCGCTGCTTCGa < 2:234806/150‑1 (MQ=255) aaGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGaa < 1:1145721/114‑1 (MQ=255) aaGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGaa > 2:1145721/1‑114 (MQ=255) gCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGc > 2:337570/1‑83 (MQ=255) gCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGc < 1:337570/83‑1 (MQ=255) gAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTTATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATc < 2:151451/150‑1 (MQ=255) tGCATGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATcgccg > 2:401723/1‑150 (MQ=255) ggCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGCGGCAAATctcctcgac < 2:994740/150‑6 (MQ=255) cccTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACg < 2:1336468/102‑1 (MQ=255) cccTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACg > 1:1336468/1‑102 (MQ=255) ccTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGc > 2:44204/1‑150 (MQ=255) cgcgAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATc > 1:551564/1‑66 (MQ=255) cgcgAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATc < 2:551564/66‑1 (MQ=255) agcgaTTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCt < 1:39012/150‑1 (MQ=255) ttCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCt < 2:45837/92‑1 (MQ=255) ttCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCt > 1:45837/1‑92 (MQ=255) gaaggtggCCGGGTTGAAGCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATcgcc < 1:1281355/118‑1 (MQ=255) gaaggtggCCGGGTTGAAGCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATcgcc > 2:1281355/7‑124 (MQ=255) cTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATCCACGAGCa > 2:701520/1‑150 (MQ=255) ggCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATCCACGAGCAGgc > 2:753410/1‑150 (MQ=255) ccGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCa < 2:482268/103‑1 (MQ=255) ccGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCa > 1:482268/1‑103 (MQ=255) ccGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATCCACGAGCAGgcgc > 1:897691/1‑150 (MQ=255) ggCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGCGCTCGGTAAGCTGCTTCGACCAGTCGCAAATCGCCGCACCCGCTGCCGGCTTCATCCACGAGCAGGCGCTg > 1:738186/1‑150 (MQ=255) | AACACCTGGGCCGCACCGGCGCACATCAACCTGGCCGACTATCACCTGTTCCGCGGCCTGGCCCTGGGCAGCCCCGAGGCCCACGGCAGCCTTGCCGACAAGCTGCGCGAGCTGCAGGCCCTGCGCGAGCGATTCAGCCGCTGGGCCGGCTTCAACCCGGCCACCTTCCGCAGCAAGCAGTTGCTAATCGAGGGCGTGATCGCCAAGCTCGAAGGCGACGGCCTGGCCGCGATCCGCTGCTTCGACCAGGCGCAAATCGCCGCCACCGCTGCCGGCTTCATCCACGAGCAGGCGCTG > NC_002947/5982709‑5983005 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |