Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 668,267 A→C 8.6% F87C (TTC→TGC) ‡ PP_0571 ← membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947668,2670AC 8.6% 193.5 / 9.8 70F87C (TTC→TGC) ‡PP_0571membrane protein
Reads supporting (aligned to +/- strand):  ref base A (28/36);  new base C (3/3);  total (31/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01

GAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGAACAACCCGCTCAAT  >  NC_002947/668120‑668413
                                                                                                                                                   |                                                                                                                                                  
gAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAAt                                                                                                                                                  >  1:164006/1‑150 (MQ=255)
    cTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGGAACCCAACGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCNGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATgcgc                                                                                                                                              <  1:964837/150‑1 (MQ=255)
      gAAAGCCTGGGGGTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCGCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATTCATGcgcgc                                                                                                                                            <  2:348573/150‑2 (MQ=255)
        aaGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGAt                                                                                                                                          <  1:214645/150‑1 (MQ=255)
         aGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGAtt                                                                                                                                         <  2:1222146/150‑1 (MQ=255)
            cgggggCTGCTTTGGCGCAGTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACATAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGcc                                                                                                                                      <  1:141600/148‑1 (MQ=255)
            cTGGGGCTGCTGTGCAGCCTTGTCGCGACGCAAGGCCCCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCNAGATGANTCAGAGGATGATNGAGGCGCGCATGAATGCGCGGATTGcc                                                                                                                                      <  1:1145482/150‑1 (MQ=255)
                   tgctgTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAca                                                                                                                               >  2:1288682/1‑150 (MQ=255)
                      tgtgCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAcagca                                                                                                                            >  1:926954/1‑150 (MQ=255)
                      acagCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAcagca                                                                                                                            <  2:331087/147‑1 (MQ=255)
                        tgCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACagcagc                                                                                                                          <  1:1405453/150‑1 (MQ=255)
                               cTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGa                                                                                                                                    >  1:646070/1‑133 (MQ=255)
                               cTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGa                                                                                                                                    <  2:646070/133‑1 (MQ=255)
                                  tcgcgacgcaaggccgctcccacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCga                                                                                                                <  2:1263176‑M2/126‑1 (MQ=255)
                                         gcaaggccgctcccacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAg                                                                                                         <  2:1088873‑M2/133‑1 (MQ=255)
                                           aaggccgctcccacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTCCAGCAGCATCAGGCCGATGATCAggg                                                                                                       >  2:323500‑M2/16‑150 (MQ=255)
                                              gccgctcccacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCa                                                                                                    >  2:690426‑M2/13‑150 (MQ=255)
                                                     ccacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGACCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCt                                                                                             >  1:1393504‑M2/6‑150 (MQ=255)
                                                      cacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGAATGAATGCTCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTc                                                                                            <  1:1243632‑M2/146‑1 (MQ=255)
                                                        caAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAg                                                                                          >  2:886382‑M2/3‑150 (MQ=255)
                                                           aGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTcagcag                                                                                       >  1:223620/1‑150 (MQ=255)
                                                             aCCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCg                                                                                     <  1:886382/150‑1 (MQ=255)
                                                               cgcgCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa                                                                                   <  2:929311/150‑1 (MQ=255)
                                                                    aGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTc                                                                              <  1:833595/150‑1 (MQ=255)
                                                                     gATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGacattgcc                                                                             >  2:811953/1‑143 (MQ=255)
                                                                     gATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTcc                                                                             <  2:843185/150‑1 (MQ=255)
                                                                      aTCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATgcgc                                                                                                                                              <  2:1268464/84‑1 (MQ=255)
                                                                      aTCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATgcgc                                                                                                                                              >  1:1268464/1‑84 (MQ=255)
                                                                         aGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGc                                                                         >  1:605883/1‑150 (MQ=255)
                                                                             gATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCaa                                                                     <  2:223620/150‑1 (MQ=255)
                                                                               tCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAgg                                                                   >  1:201307/1‑150 (MQ=255)
                                                                                         catcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCCCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAg                                                         <  1:690426/150‑1 (MQ=255)
                                                                                           tcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGc                                                       <  2:605883/150‑1 (MQ=255)
                                                                                             aCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAgg                                                                                                                    <  2:22751/87‑1 (MQ=255)
                                                                                             aCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAgg                                                                                                                    >  1:22751/1‑87 (MQ=255)
                                                                                             aCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCa                                                     >  1:135945/1‑150 (MQ=255)
                                                                                               ccACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCAt                                                                           <  1:200136/126‑1 (MQ=255)
                                                                                               ccACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCAt                                                                           >  2:200136/1‑126 (MQ=255)
                                                                                               ccACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAAGCGCGTGCGAGTCCATc                                                   >  2:1149825/1‑150 (MQ=255)
                                                                                                 acaGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTgtgc                                                              >  1:950583/1‑137 (MQ=255)
                                                                                                 acaGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTgtgc                                                              <  2:950583/137‑1 (MQ=255)
                                                                                                 acaGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGa                                                 <  1:1288682/150‑1 (MQ=255)
                                                                                                 acaGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGa                                                 <  1:290004/150‑1 (MQ=255)
                                                                                                    gCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGa                                              >  2:887806/1‑150 (MQ=255)
                                                                                                     ccccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAg                                                                                                         >  1:919743/1‑90 (MQ=255)
                                                                                                     ccccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAg                                                                                                         <  2:919743/90‑1 (MQ=255)
                                                                                                     ccccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGTCAGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCTATGaa                                             <  1:811953/150‑1 (MQ=255)
                                                                                                     ccccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGaa                                             <  2:201307/150‑1 (MQ=255)
                                                                                                       ccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa                                                                                   >  2:505456/1‑110 (MQ=255)
                                                                                                       ccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa                                                                                   <  1:505456/110‑1 (MQ=255)
                                                                                                        cAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGtt                                          >  2:1079135/1‑150 (MQ=255)
                                                                                                               agccagATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCg                                   <  2:135945/150‑1 (MQ=255)
                                                                                                                   agATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGa                                                 <  1:681688/132‑1 (MQ=255)
                                                                                                                   agATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGa                                                 >  2:681688/1‑132 (MQ=255)
                                                                                                                         ttCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCca                         <  1:285246/150‑1 (MQ=255)
                                                                                                                            cGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCcagca                      <  2:926954/150‑1 (MQ=255)
                                                                                                                               ggATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGt                   <  2:983530/150‑1 (MQ=255)
                                                                                                                                gatgatCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGtt                                          >  2:1208766/1‑126 (MQ=255)
                                                                                                                                gatgatCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGtt                                          <  1:1208766/126‑1 (MQ=255)
                                                                                                                                gatgatCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGtt                  <  1:1308778/150‑1 (MQ=255)
                                                                                                                                gaggagcGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGtt                  >  2:1308778/7‑150 (MQ=255)
                                                                                                                                 attatCGAGAAGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATAAGGCCGATTATCAGGGCCAGGATGCTCAGCAGCAAAGAATCCATGCCCAAGGTGCACGACAGGCAATCGATAAAGTTGCCACCAGCATTAGCCAGCAGGtag                 >  2:143878/4‑148 (MQ=255)
                                                                                                                                     tCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGaaca             >  1:284559/1‑150 (MQ=255)
                                                                                                                                        atccgcgcATTCATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCa                                >  1:92572/4‑128 (MQ=255)
                                                                                                                                        atccgcgcATTCATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCa                                <  2:92572/125‑1 (MQ=255)
                                                                                                                                         tccgcgcATTCATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACa                                                          <  2:673394/99‑1 (MQ=255)
                                                                                                                                         tccgcgcATTCATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGGGTCCATGCCCAAGGTGCGCGaaa                                                          >  1:673394/3‑99 (MQ=255)
                                                                                                                                            gcgcATTCATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAggg                                                                                                       >  2:60075/1‑53 (MQ=38)
                                                                                                                                              gcATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACAGGCATTGGCCAGCAGGTTGAACAACCCGCTCa    >  2:781292/1‑150 (MQ=255)
                                                                                                                                                aTGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGAACAACCCGCTCAAt  <  2:1393504/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGAACAACCCGCTCAAT  >  NC_002947/668120‑668413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: