| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 795,305 | G→C | 6.5% | V482L (GTA→CTA) | PP_0680 → | ATP‑dependent protease‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 795,305 | 0 | G | C | 6.5% | 216.6 / 4.8 | 71 | V482L (GTA→CTA) | PP_0680 | ATP‑dependent protease‑like protein |
| Reads supporting (aligned to +/- strand): ref base G (34/32); new base C (2/3); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
CCACGACCCGGACTTCCAGGAGATGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGACCGACGCAG > NC_002947/795157‑795443 | ccACGACCCGGACTTCCAGGAGATGTTCCGCGTGATAGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGt > 2:1231644/1‑150 (MQ=255) aCGACCCGGACTTCCAGGAGATGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAg > 1:716832/1‑150 (MQ=255) ccGGACTTCCAGGAGATGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGt > 2:1149093/1‑150 (MQ=255) ggACTGCCAGGGGATGTGCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCt < 2:441021/150‑1 (MQ=255) ttCCAGGAGATGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGcc > 2:288220/1‑150 (MQ=255) aGGAGATGTTCCGCGTGCTGGTGGACTTCGATGAAGAAATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCt > 2:1144938/1‑150 (MQ=255) gagaTGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTAc > 2:1282805/1‑150 (MQ=255) gagaTGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCACCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTAc > 2:1164159/1‑150 (MQ=255) agaTGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCACCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACa < 1:1164159/150‑1 (MQ=255) tCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTc < 1:119025/150‑1 (MQ=255) tggtggACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGCGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAGCGAAGAGGGCATGGGGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACATTGCTCGTCTGGCCg > 1:579729/1‑150 (MQ=255) ttCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCAc > 2:282465/1‑122 (MQ=255) ttCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCAc < 1:282465/122‑1 (MQ=255) ttCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTc > 2:2678/1‑133 (MQ=255) ttCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTc < 1:2678/133‑1 (MQ=255) cGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTGCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTc < 2:1226011/150‑1 (MQ=255) gATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCAc > 1:971141/1‑119 (MQ=255) gATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCAc < 2:971141/119‑1 (MQ=255) aGACATGCCGATGTTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCCCCGCTGTAAGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCt < 1:88168/150‑1 (MQ=255) aCATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCTCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGt < 2:867238/150‑1 (MQ=255) aTGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGACTGTCa > 1:1077919/1‑150 (MQ=255) ccGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAgcg > 1:504727/1‑150 (MQ=255) cGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAgcgc < 1:1231644/150‑1 (MQ=255) cGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAgcgc < 1:1149093/150‑1 (MQ=255) cGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAgcgc < 1:94474/150‑1 (MQ=255) aTGATCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCAGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCGCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGcgcgg > 2:1355987/1‑149 (MQ=255) gcgacgaGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGGCGCGCCTGTCAGCGCGTATCg > 2:673190/2‑150 (MQ=255) gactaGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGCTACCGCGTcact < 1:1386628/94‑4 (MQ=255) gacgaGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAAc > 1:1004102/1‑123 (MQ=255) gacgaGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAAc < 2:1004102/123‑1 (MQ=255) gacgaGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGCTACCGCGTcact > 2:1386628/1‑91 (MQ=255) aaCCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGAGACGCGCTACCGCGTcactg < 1:1299850/89‑5 (MQ=255) aaCCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGAGACGCGCTACCGCGTcactg > 2:1299850/1‑85 (MQ=255) cTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTc > 1:751404/1‑150 (MQ=255) cTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTc > 1:1006138/1‑150 (MQ=255) tGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTcc < 1:39563/150‑1 (MQ=255) cAGTTCGCCAAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTGTGGCCAACTACAGTGCTCGTCTGGCCGAAAACCAGTAGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTg < 2:623865/150‑1 (MQ=255) ccAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGcc > 1:1353743/1‑110 (MQ=255) ccAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGcc < 2:1353743/110‑1 (MQ=255) ccAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGa > 2:369373/1‑150 (MQ=255) cAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAg < 2:716832/150‑1 (MQ=255) gTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGa < 1:288220/150‑1 (MQ=255) ttGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGAt > 1:212916/1‑150 (MQ=255) cgcacccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTc > 2:2696/1‑150 (MQ=255) cgcacccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTc < 1:2696/150‑1 (MQ=255) gcacccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTcgc < 1:72971/96‑1 (MQ=255) gcacccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTcgc > 2:72971/1‑96 (MQ=255) ccggcaccAGCGAAGAGGCCATGGCGCCGCTGACCAATGACTCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTTTTCCAGCTGTTCAGCGAGGCTGATTTCATTc < 2:579729/147‑1 (MQ=255) cccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTc > 1:510289/1‑150 (MQ=255) cccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTc < 2:1069633/150‑1 (MQ=255) ccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTa < 2:1010954/107‑1 (MQ=255) ccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTa > 1:1010954/1‑107 (MQ=255) ccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCt < 1:1219563/126‑1 (MQ=255) ccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCt > 2:1219563/1‑126 (MQ=255) ccgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCg > 2:1111413/1‑150 (MQ=255) cgcaccAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGc < 1:1282805/150‑1 (MQ=255) taaCGAAGAGGGCATGGCGCCGCTGACCAGTGACGCCCTCCGGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCt < 1:374565/149‑1 (MQ=255) aCGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCCGGGCATATCCGTAAAAGGCCACAGCTGGGCAGCAAGACTGATTTATTTAGCctgctgc > 2:374565/1‑149 (MQ=255) gagGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGt > 2:1019022/1‑150 (MQ=255) ggCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTc < 1:537697/133‑1 (MQ=255) ggCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTc > 2:537697/1‑133 (MQ=255) gCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACg > 1:1426580/1‑150 (MQ=255) tGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGaaa < 2:510289/150‑1 (MQ=255) gccgcTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGAc < 2:504727/150‑1 (MQ=255) gccgcTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGAc < 1:369373/150‑1 (MQ=255) gACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGACCGACGc > 1:561509/1‑150 (MQ=255) ccAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGACCGACGCAg < 2:1006138/150‑1 (MQ=255) cAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTc > 2:746911/1‑116 (MQ=255) cAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTc < 1:746911/116‑1 (MQ=255) gcgGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTg > 1:1402389/1‑87 (MQ=255) gcgGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTg < 2:1402389/87‑1 (MQ=255) ggTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGACCGAc > 1:76261/1‑136 (MQ=255) ggTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGACCGAc < 2:76261/136‑1 (MQ=255) | CCACGACCCGGACTTCCAGGAGATGTTCCGCGTGCTGGTGGACTTCGATGAAGACATGCCGATGGTCGACGAGAACCTGGAGCAGTTCGCCCAGCTGTTGCGCACCCGCACCAACGAAGAGGGCATGGCGCCGCTGACCAGTGACGCGGTAGCGCGTCTGGCCACCTACAGTGCTCGTCTGGCCGAAAACCAGTCGCGCCTGTCAGCGCGTATCGGTGACCTGTTCCAGCTGGTCAGCGAGGCTGATTTCATTCGCCAGCTGGCCAGTGACGAAATGACCGACGCAG > NC_002947/795157‑795443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |