| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 74,066 | G→A | 5.0% | R181H (CGT→CAT) | PP_0063 → | lipid A biosynthesis lauroyl acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 74,066 | 0 | G | A | 5.0% | 240.8 / 2.4 | 79 | R181H (CGT→CAT) | PP_0063 | lipid A biosynthesis lauroyl acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (37/38); new base A (2/2); total (39/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.46e-01 | |||||||||||
AACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATG > NC_002947/73921‑74212 | aaCCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGAGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCgtggt < 2:1023093/150‑1 (MQ=255) aaCCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTgg > 2:78293/1‑150 (MQ=255) ccGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGt > 2:42540/1‑150 (MQ=255) gATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTAt < 1:1284503/150‑1 (MQ=255) atcatcTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTAtt < 2:1369124/150‑1 (MQ=255) tcttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAg < 2:790201/137‑1 (MQ=255) tcttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAg > 1:790201/1‑137 (MQ=255) tcttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTg < 1:1054038/150‑1 (MQ=255) tcttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTg > 1:733969/1‑150 (MQ=255) tcttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTg > 1:1273579/1‑150 (MQ=255) cttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGc < 1:961278/150‑1 (MQ=255) cttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGc < 1:42540/150‑1 (MQ=255) ttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGc < 1:897188/149‑1 (MQ=255) ttctACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGc > 2:897188/1‑149 (MQ=255) ccgcccgcCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTgg < 2:181461/134‑1 (MQ=255) ccgcccgcCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTgg > 1:181461/1‑134 (MQ=255) cccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCGCATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGa > 1:36715/1‑150 (MQ=255) cccgccGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGa > 2:101209/1‑150 (MQ=255) ccgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCGAGGTGGGTATTCCTGCCGACCCGGAGCcg > 2:1180708/1‑150 (MQ=255) ccgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCcg < 2:333715/150‑1 (MQ=255) cgAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCcgg < 2:1273579/150‑1 (MQ=255) gAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCcggc > 1:198780/1‑150 (MQ=255) aaGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCcggcg > 1:1199198/1‑150 (MQ=255) gAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATc < 1:935014/150‑1 (MQ=255) aaGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcg < 2:582382/150‑1 (MQ=255) aaGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcg < 1:1329580/150‑1 (MQ=255) ggCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcggc > 1:633578/1‑150 (MQ=255) gACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGATTCGGCGGGCGTTTTc < 2:1156412/150‑1 (MQ=255) ccTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGt > 1:136391/1‑150 (MQ=255) ctgctgCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTa > 2:160061/1‑150 (MQ=255) tgctgcGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTAc < 1:160061/150‑1 (MQ=255) gAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTc < 1:1223430/150‑1 (MQ=255) gAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTc > 2:684305/1‑150 (MQ=255) agcGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCa > 2:402087/1‑150 (MQ=255) cgcgTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCATGGTGGCCAGGTGGGTATTCCTGCCGAcc > 1:907887/1‑103 (MQ=255) cgcgTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCATGGTGGCCAGGTGGGTATTCCTGCCGAcc < 2:907887/103‑1 (MQ=255) tGCAGACGGGGAATGGCGGGGCACCGTGGACGGAGGAAGGCCGCCGCATGGTTATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGTGGAATCGGCGGGGGTGTTCGTATCGTTCCTCGGCACCCAgg > 2:201434/1‑150 (MQ=255) cAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGgcg < 1:402087/150‑1 (MQ=255) gATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTc > 2:1332632/1‑136 (MQ=255) gATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTc < 1:1332632/136‑1 (MQ=255) gATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCg < 1:1206649/137‑1 (MQ=255) gATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCg > 2:1206649/1‑137 (MQ=255) gggCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGAc < 1:78293/150‑1 (MQ=255) gggCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGAc < 2:136391/150‑1 (MQ=255) gCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCa < 2:733969/150‑1 (MQ=255) aaTCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGc > 2:57468/1‑150 (MQ=255) aaTCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGc > 2:1132916/1‑150 (MQ=255) aaTCGCGTGGAACCGGCTACCAAGGAAGGCATCCTCAGCGTGATCAAGGACGTGCGCCGTAGTTGCAAGCTGGTTACTCCAGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGc < 1:101209/150‑1 (MQ=255) tCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCa > 2:1369083/1‑131 (MQ=255) tCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCa < 1:1369083/131‑1 (MQ=255) tCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCaa > 1:127210/1‑150 (MQ=255) cACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGc < 2:633578/150‑1 (MQ=255) cACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCGGCCGACCCGGAGCCGGCTGAATCCACGGCCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGc < 2:198780/150‑1 (MQ=255) cACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCGGCCGACCCGCAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGc < 1:1169336/150‑1 (MQ=255) aCCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcggc > 2:478752/1‑96 (MQ=255) aCCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcggc < 1:478752/96‑1 (MQ=255) gTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGaa < 1:1132916/150‑1 (MQ=255) cAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGa < 2:913800/143‑1 (MQ=255) cAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGa > 1:913800/1‑143 (MQ=255) aaggaaggCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTc > 2:583072/1‑135 (MQ=255) aaggaaggCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTc < 1:583072/135‑1 (MQ=255) aTCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGc > 2:1086780/1‑150 (MQ=255) aTCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGc > 1:793486/1‑150 (MQ=255) aTCCTCAGCGTGATCAAGGAAGTGCGCCATGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcggcgg > 2:995764/1‑79 (MQ=255) aTCCTCAGCGTGATCAAGGAAGTGCGCCATGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATcggcgg < 1:995764/79‑1 (MQ=255) cTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAg > 2:917287/1‑150 (MQ=255) cAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGCCCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGc < 1:1149076/150‑1 (MQ=255) cGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGGCCAGCATGTTCG‑GCACGAACTTGCTggtc < 2:433739/136‑3 (MQ=255) cGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGGCCAGCATGTTCG‑GCACGAACTTGCTggtc > 1:433739/1‑134 (MQ=255) aTCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGgt > 2:1148031/1‑150 (MQ=255) aTCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGgt < 1:413489/150‑1 (MQ=255) aaGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCaa > 2:685314/1‑107 (MQ=255) aaGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCaa < 1:685314/107‑1 (MQ=255) ggAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTg > 2:355620/1‑124 (MQ=255) ggAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTg < 1:355620/124‑1 (MQ=255) gAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGgt > 2:230156/1‑144 (MQ=255) gAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGgt < 1:230156/144‑1 (MQ=255) gTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTg > 2:1381715/1‑150 (MQ=255) cgcCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCAt < 1:1148031/150‑1 (MQ=255) gcCGTGGTGGCCAGGAGGGTATTCCTGCCGACCCGGAGCCGGCGGCATCGGCGGGCGTGTTCGTACAGTTGCATCACAGCCTTGCTCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATg > 2:49106/1‑150 (MQ=255) | AACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGACCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTCGACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGC‑CGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATG > NC_002947/73921‑74212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |