Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,097,043 G→C 6.6% A150G (GCC→GGC)  PP_0954 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,097,0430GC 6.6% 188.4 / 4.0 61A150G (GCC→GGC) PP_0954hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (30/27);  new base C (2/2);  total (32/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01

ACAGGCTGACATCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGCCCCAGCCTTTCATCTT  >  NC_002947/1096894‑1097188
                                                                                                                                                     |                                                                                                                                                 
aCAGTCTGACATCTCGTACTACCTTCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCAATGCGCTGACGGAGTGCTGTCACATTGACACCGCGACcgg                                                                                                                                                   <  2:681102/150‑1 (MQ=255)
    gCTGACATCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGt                                                                                                                                               >  1:1060893/1‑150 (MQ=255)
    gCTGACATCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGt                                                                                                                                               <  2:1060893/150‑1 (MQ=255)
          aTCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCAc                                                                                                                                         >  1:620174/1‑150 (MQ=255)
          aTCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGCCGGTCGcggt                                                                                                                                         <  2:576086/150‑4 (MQ=255)
           tCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCAcc                                                                                                                                        >  2:604722/1‑150 (MQ=255)
           tCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTCCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTGGCCAcc                                                                                                                                        >  1:12709/1‑150 (MQ=255)
              cGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgg                                                                                                                                     <  1:371371/150‑1 (MQ=255)
              cGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgg                                                                                                                                     <  1:371005/150‑1 (MQ=255)
               gTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctggg                                                                                                                                    >  2:1265116/1‑150 (MQ=255)
                    gccggccgccCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtctgg                                                                                                                               >  1:49901/5‑150 (MQ=255)
                    acCTGTCGCGCCTCGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGTCATTTACTCGGCCTTCTTCTTGGCCTGGATCACCATGCCGATGCGCTCACGGGGTGTTGTCACATTGCCACCTCTACCGGCGGTCGTCACctgtgtctgg                                                                                                                               <  2:182437/150‑1 (MQ=255)
                     ccTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtctggg                                                                                                                              >  1:522447/1‑150 (MQ=255)
                      cTGCCGCCCCTTGTAGCTCTTCGGCAGCTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTCCTTCTTGGTCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtctgggt                                                                                                                             <  2:12709/150‑1 (MQ=255)
                             cccTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAg                                                                                                                      >  2:602095/1‑150 (MQ=255)
                               cTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACATGGGTCTGGGTGTTGTAGAc                                                                                                                    >  2:465792/1‑150 (MQ=255)
                                   tAGCGCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATc                                                                                                                <  1:1265116/150‑1 (MQ=255)
                                    aGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtct                                                                                                                                 >  2:805231/1‑132 (MQ=255)
                                    aGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtct                                                                                                                                 <  1:805231/132‑1 (MQ=255)
                                     gCTCTTTGCCAGGTGCTGGGGTGTGAGTGTTTCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGAGTGCTCTAACGTTGAAGCGGCTGCGGGGGGCAGTCAGCGGGGGCTGGGTGTTGTAGACGATCtt                                                                                                              >  2:1379276/1‑150 (MQ=255)
                                         tttGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCg                                                                                                          <  2:522447/150‑1 (MQ=255)
                                            tccAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGGCTTATTCTTGGGCTGGATCACCCTGGCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGANCGGCGGNCGCCACCTGGGTNTGGGTGTTGTAGACGATCTTTTCGCCt                                                                                                       <  1:1288509/149‑1 (MQ=255)
                                              cAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGGGTTGTAGACGATCTTTTCGCCtta                                                                                                     >  2:1288509/1‑149 (MQ=255)
                                                 gTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCggt                                                                                                  <  1:465792/150‑1 (MQ=255)
                                                  tGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCggtg                                                                                                 <  2:620174/150‑1 (MQ=255)
                                                  tGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCggtg                                                                                                 <  1:904270/150‑1 (MQ=255)
                                                         cTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCgtctgggtctgg                                                                                                                               <  2:350132/113‑1 (MQ=255)
                                                         cTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtctgg                                                                                                                               >  1:350132/1‑113 (MQ=255)
                                                             tctggTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACCCTCGTTTCGCCTTCGGTGGTATTGCCTTc                                                                                      <  1:970034/147‑1 (MQ=255)
                                                                 gTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGGCTTGGTGATGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCgaga                                                                                  >  2:970034/1‑147 (MQ=255)
                                                                     ccATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACTGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGa                                                                              <  1:1379276/150‑1 (MQ=255)
                                                                     ccATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGa                                                                              >  1:264107/1‑150 (MQ=255)
                                                                             tCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTggtg                                                                      >  1:322425/1‑148 (MQ=255)
                                                                                gCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtctgg                                                                                                                               <  1:1349893/90‑1 (MQ=255)
                                                                                gCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACctgggtctgg                                                                                                                               >  2:1349893/1‑90 (MQ=255)
                                                                                gCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACCACCTTATCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGcgg                                                                   <  2:49901/150‑1 (MQ=255)
                                                                                  cttcttcttGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGcggtc                                                                 >  1:533824/1‑150 (MQ=255)
                                                                                   ttcttcttGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGcggtcg                                                                >  2:1265107/1‑150 (MQ=255)
                                                                                       tcttGGGCTGGATCACCCTGTCGATGCGCTGACTGGTTTTTGTCACATTGCCACCGCGACCGGCGGCATACGCCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTga                                                            <  1:1095772/150‑1 (MQ=255)
                                                                                       tcttGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGc                                                                                                                                            <  2:1115916/70‑1 (MQ=255)
                                                                                       tcttGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGc                                                                                                                                            >  1:1115916/1‑70 (MQ=255)
                                                                                         ttGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGTGCGGTCGGTgaga                                                          <  2:322425/150‑1 (MQ=255)
                                                                                                      ccATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCt                                             >  1:791210/1‑150 (MQ=255)
                                                                                                           ttgATGCGCAGACGGTGTGGTGATAGATTGCTACCGCGACTGGCGGTCGTCACCTGGGTCTGGGTGTTGTAGACTAGCTTTTGTGCTTCGGTGGTATGGCCTTCGCTCTCGCCCGTGGCGTGGTCGGTTGGAATGACCATGTCCTTCTGc                                        <  2:81763/148‑1 (MQ=255)
                                                                                                           tCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGc                                        <  1:907021/150‑1 (MQ=255)
                                                                                                             gATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTTTAGACCAGCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGa                                      <  1:602095/150‑1 (MQ=255)
                                                                                                              aTGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGAc                                     >  2:1191552/1‑150 (MQ=255)
                                                                                                                      aCGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTg                             >  1:1045295/1‑150 (MQ=255)
                                                                                                                          ggTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATg                         <  1:604722/150‑1 (MQ=255)
                                                                                                                                gtCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACg                   >  2:1037122/1‑150 (MQ=255)
                                                                                                                                 tCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGc                  >  2:1257397/1‑150 (MQ=255)
                                                                                                                                 tCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGc                  >  1:847250/1‑150 (MQ=255)
                                                                                                                                    gaacgCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGcccc               >  1:1119137/5‑150 (MQ=255)
                                                                                                                                     aTTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGgcgc                                                                     >  1:914456/1‑95 (MQ=255)
                                                                                                                                     aTTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGgcgc                                                                     <  2:914456/95‑1 (MQ=255)
                                                                                                                                     aTTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGCCCCa              <  2:264107/150‑1 (MQ=255)
                                                                                                                                         ccACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGCCCCAGCCt          <  1:1037122/150‑1 (MQ=255)
                                                                                                                                           aCCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGCCCCAGCCttt        >  2:632501/1‑150 (MQ=255)
                                                                                                                                            tggcgACCGCCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGt                       >  1:870304/3‑134 (MQ=255)
                                                                                                                                            tggcgACCGCCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGt                       <  2:870304/132‑1 (MQ=255)
                                                                                                                                            tggcgACCGCCGGTACACACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGCCCCAGCCTTTc       >  2:1196756/3‑150 (MQ=255)
                                                                                                                                                 aCCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTTTTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGCCCCAGCCTTTCATCtt  >  2:580499/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
ACAGGCTGACATCACGTACTACCTGCCGCCCCTTGTAGCTCTTTGCCAGGTGCTGGGCTTTGAGGGTTGCCATTTACTCGGCCTTCTTCTTGGGCTGGATCACCATGTCGATGCGCTGACGGGGTGTTGTCACATTGCCACCGCGACCGGCGGTCGCCACCTGGGTCTGGGTGTTGTAGACGATCTTTTCGCCTTCGGTGGTATTGCCTTCGCTCTCGACCTTGGCGCGGTCGGTGAGAATGACCAAGTCCTTCTGCGACTGGTACTGGATGGTTACGCCCCAGCCTTTCATCTT  >  NC_002947/1096894‑1097188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: