| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,205,652 | T→C | 11.7% | E39G (GAG→GGG) | PP_1057 ← | PadR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,205,652 | 0 | T | C | 11.7% | 212.3 / 15.1 | 84 | E39G (GAG→GGG) | PP_1057 | PadR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (38/36); new base C (4/6); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.19e-01 | |||||||||||
TTTGCTGCCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATC > NC_002947/1205507‑1205798 | tttGCTGCCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGc > 2:886681/1‑150 (MQ=255) ctgcCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGc > 2:795079/1‑150 (MQ=255) tgcCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCa > 1:1353652/1‑150 (MQ=255) tgcCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGAGCAGCCCGGCCacgg < 2:142195/150‑4 (MQ=255) tgcCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGAGCAGCCCGGCCacgg < 1:644124/150‑4 (MQ=255) tgcCTTGTACCTGGCCGCGGATAAGTTCTGCCTCTTCAAGGCAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCa > 2:578216/1‑150 (MQ=255) gcCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGCTCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCaa < 2:557526/150‑1 (MQ=255) ccTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAg > 1:597953/1‑150 (MQ=255) tGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTcc > 1:920362/1‑150 (MQ=255) gTACCTGGCCGCTGATCAGTCTGGTCTCTTCGAGGAATGTCAGCGTGGGGTAGATCACTCCCGGCTTCGCGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCa < 1:957866/150‑1 (MQ=255) tGGCCGCTGGTCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATc > 2:996694/1‑150 (MQ=255) tGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATc > 2:1295600/1‑150 (MQ=255) cggCCGCTGATCGGTTCGGCCTCTTCAAGGAAGTTCAGCTTGGGGTAGACCCCTCAAGGCCTTGCGCTGTAGCTGCCCTCCAACACAGTTTCGCTCTTGTACCTCAGTTCAGAACCGTGGCGTGGCCTCCCGTCCCGCAAGTCCACCATc < 2:308386/149‑1 (MQ=255) ggCCGCTGATCAATTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATca < 1:350066/150‑1 (MQ=255) gCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATCTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATcag > 2:574748/1‑150 (MQ=255) tGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCt > 2:759961/1‑150 (MQ=255) gATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATccgca < 2:1309204/146‑1 (MQ=255) gATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATcagca > 1:1309204/1‑146 (MQ=255) cAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCTATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg < 2:252523/150‑1 (MQ=255) gTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAg > 1:1409803/1‑133 (MQ=255) gTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAg < 2:1409803/133‑1 (MQ=255) tCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCg > 1:1200469/1‑150 (MQ=255) aaGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGaa < 2:1200469/150‑1 (MQ=255) aaGGAAGTTCAGCGTGGGGTAGATCACTCAAGGGCTTGGGCTGTAGCTGCCGTCGAACCGATATTCGATCTGGGGGAGCAGGTCGTAACCGTGGCCGGGCTGCTCGGCTAGCAAGTACAGCATGAGAAGATTGAGGGAACTCgggcggaa > 2:441435/1‑145 (MQ=255) aGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAg > 2:928197/1‑150 (MQ=255) ggAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACATATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGa < 1:1078415/150‑1 (MQ=255) ttCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCa > 2:659543/1‑103 (MQ=255) ttCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCa < 1:659543/103‑1 (MQ=255) tCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACAcgcg > 2:1258551/1‑150 (MQ=255) aGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCggg < 2:1337434/150‑1 (MQ=255) ggTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGc > 2:257552/1‑104 (MQ=255) ggTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGc < 1:257552/104‑1 (MQ=255) tAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCg > 2:483943/1‑150 (MQ=255) aGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGc < 1:928197/150‑1 (MQ=255) aTCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg > 1:1288195/1‑113 (MQ=255) aTCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg < 2:1288195/113‑1 (MQ=255) tCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCAc > 2:1221958/1‑150 (MQ=255) tCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCgg > 2:294475/1‑132 (MQ=255) tCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCgg < 1:294475/132‑1 (MQ=255) tCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGAGCAGCCCGGCCacgg < 1:805042/86‑4 (MQ=255) tCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGAGCAGCCCGGCCacgg > 2:805042/1‑83 (MQ=255) tCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGAGCAGCCCGGCCacg > 2:1273117/1‑83 (MQ=255) tCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGAGCAGCCCGGCCacg < 1:1273117/85‑3 (MQ=255) cAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGc > 1:918135/1‑79 (MQ=255) cAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGc < 2:918135/79‑1 (MQ=255) cAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCAcgggcgg < 1:578216/150‑1 (MQ=255) cAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCAcgggcgg < 1:759961/150‑1 (MQ=255) gCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACgggcggggcg > 2:1204242/1‑150 (MQ=255) cTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg < 2:1019207/95‑1 (MQ=255) cTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg > 1:1019207/1‑95 (MQ=255) gTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTGGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGaa < 1:441435/150‑1 (MQ=255) gTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGaa < 1:1204242/150‑1 (MQ=255) gTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGaa < 1:886681/150‑1 (MQ=255) gTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGaa < 2:1353652/150‑1 (MQ=255) tGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCTGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGAt < 2:920362/150‑1 (MQ=255) tGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGAt < 2:616363/150‑1 (MQ=255) gCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATc < 1:795079/150‑1 (MQ=255) gCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATc > 2:544778/1‑150 (MQ=255) ccGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCa > 2:397026/1‑150 (MQ=255) gTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCgg < 2:1273807/108‑1 (MQ=255) gTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCgg > 1:1273807/1‑108 (MQ=255) cGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGc > 2:1115995/1‑68 (MQ=255) cGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGc < 1:1115995/68‑1 (MQ=255) gAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAgg < 2:597953/150‑1 (MQ=255) gAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAgg > 1:1343154/1‑150 (MQ=255) gAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTACAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGatg > 2:1011519/1‑148 (MQ=255) aCAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAgggg > 1:120902/1‑150 (MQ=255) aCAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAAGCGACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGAGCATGAgggg > 1:1022500/1‑150 (MQ=255) cAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg < 2:1220020/78‑1 (MQ=255) cAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAg > 1:1220020/1‑78 (MQ=255) aTTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATg < 1:1221958/150‑1 (MQ=255) gTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCt > 2:334387/1‑150 (MQ=255) tAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCatagggataggg < 1:1297914/144‑1 (MQ=255) tAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCatagggataggg > 2:1297914/1‑144 (MQ=255) cttgctGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCAGACCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCcgtc > 1:88604/6‑150 (MQ=255) ctGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTcgc < 1:776392/124‑1 (MQ=255) ctGGCCGAGCAGCCCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTcgc > 2:776392/2‑125 (MQ=255) tGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGCAGTCACGCGGGCCGCGCTCGCCACGGGCGGGGTGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTg < 1:574748/150‑1 (MQ=255) tGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGAGACGCGGGCCGCGCTCGCCAcgggcgg < 2:765505/88‑1 (MQ=255) tGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCAcgggcgg > 1:765505/1‑88 (MQ=255) gCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGttt < 2:501570/147‑1 (MQ=255) gCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGttt > 1:501570/1‑147 (MQ=255) ccGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGa < 1:790282/150‑1 (MQ=255) gggCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGata < 1:483943/150‑1 (MQ=255) tggtCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATc > 1:1425073/4‑150 (MQ=255) tgctCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATc < 1:1194460/150‑1 (MQ=255) | TTTGCTGCCTTGTACCTGGCCGCTGATCAGTTCGGCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATC > NC_002947/1205507‑1205798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |