| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,229,553 | G→C | 11.8% | Q909H (CAG→CAC) | PP_1072 → | leucine‑rich repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,229,553 | 0 | G | C | 11.8% | 187.0 / 17.2 | 68 | Q909H (CAG→CAC) | PP_1072 | leucine‑rich repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (30/30); new base C (5/3); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.43e-01 | |||||||||||
TGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGCCCGA > NC_002947/1229409‑1229702 | tGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGgcg > 1:498912/1‑150 (MQ=255) tATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCat < 1:791051/150‑2 (MQ=255) tATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAg < 1:790023/150‑1 (MQ=255) aTTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg > 1:1242862/1‑150 (MQ=255) aTTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAgg > 2:256758/1‑150 (MQ=255) ttCACCAAGTGTTTCCGCCGATGACAGGCGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGACCGGCGGGTATTGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAggc < 1:247176/150‑2 (MQ=255) ttCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAggg > 1:452836/1‑150 (MQ=255) aCCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATg > 2:341497/1‑150 (MQ=255) cgaaGTTTGTCCGGCGATGATTGACGGGGAGCTAAAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGc < 2:7310/148‑1 (MQ=255) ccAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTACCAG‑GTAGTCGCAGCTAGCTCACGGGGCAGTGAGCGCGCCTGCGTCAGAGCCTTCGCCAGTGGCGCAGGGATGc > 1:1095940/1‑150 (MQ=255) cAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCATGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGcc > 1:7310/1‑150 (MQ=255) aaGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCa < 2:1242862/150‑1 (MQ=255) ttCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAAcc > 2:1152317/1‑150 (MQ=255) ccGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCa > 2:818256/1‑150 (MQ=255) gaTGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGa < 1:732261/150‑1 (MQ=255) gACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGGGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGAGGCCAGTAACCCACTGGACGc < 2:388383/150‑1 (MQ=255) cAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCtt < 1:90329/150‑1 (MQ=255) aCGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg > 2:1349222/1‑122 (MQ=255) aCGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCACTGGCGCAgg < 1:1349222/122‑1 (MQ=255) ggggAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAcgc > 2:1309617/1‑150 (MQ=255) aCAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGTACAAGGATGTCATTAACCCACTGGACGCTTTACGCCTCCGTCg < 1:274679/150‑1 (MQ=255) cTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGcc > 2:924992/1‑150 (MQ=255) tGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCCGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCGGt < 2:1315396/150‑1 (MQ=255) tCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGc > 2:1003631/1‑150 (MQ=255) cATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCgccagctt > 2:190068/1‑143 (MQ=255) aTGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGa > 1:862608/1‑150 (MQ=255) gcgAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGcc > 1:129026/1‑133 (MQ=255) gcgAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGcc < 2:129026/133‑1 (MQ=255) gAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAcgcc > 2:803034/1‑111 (MQ=255) gAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTAcgcc < 1:803034/111‑1 (MQ=255) gAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggcggc > 2:179483/1‑150 (MQ=255) gAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTggcggc < 2:396760/150‑1 (MQ=255) ggTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAg > 1:50364/1‑149 (MQ=255) ggTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAg < 2:50364/149‑1 (MQ=255) ggTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGa > 1:446360/1‑150 (MQ=255) ggAGCACT‑ACAGCCAGCTGACGGGGCANTTGGCGCGCCTGNGTCAGANCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACcga > 1:792971/1‑150 (MQ=255) gAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACcgac < 1:1309617/150‑1 (MQ=255) agccagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCggg < 2:498912/150‑1 (MQ=255) agccagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCggg < 2:1157076/150‑1 (MQ=255) gccagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGgcggcg > 1:867069/1‑127 (MQ=255) gccagcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGgcggcg < 2:867069/127‑1 (MQ=255) agcTGACGGGGCAGTTGGCGCGCCTTCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACt > 1:216136/1‑150 (MQ=255) agcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAg > 1:1363859/1‑128 (MQ=255) agcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAg < 2:1363859/128‑1 (MQ=255) gcTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTa < 1:341497/150‑1 (MQ=255) tGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTa > 1:694998/1‑77 (MQ=255) tGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTa < 2:694998/77‑1 (MQ=255) tGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTCcg > 1:384900/1‑150 (MQ=255) ggCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGa < 2:862608/150‑1 (MQ=255) tGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGGAGGGATGCCAGCAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGAtcatca < 2:390940/150‑1 (MQ=255) tGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGCACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGAtcatca < 1:1152317/150‑1 (MQ=255) cgcCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGga < 1:1003631/150‑1 (MQ=255) cTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGga < 2:801910/147‑1 (MQ=255) cTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGga > 1:801910/1‑147 (MQ=255) ctCAGAGCCTGCGCCAGTGGCGCATGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCGGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCACCAGCGGAGAGCGTa < 1:790322/149‑1 (MQ=255) tCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCTGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTAt > 2:137899/1‑150 (MQ=255) gagCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCgg < 1:818256/150‑1 (MQ=255) gagCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCgg < 1:256758/150‑1 (MQ=255) cccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGa > 1:1252104/2‑150 (MQ=255) ccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGaa > 1:171034/1‑80 (MQ=255) ccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGaa < 2:171034/80‑1 (MQ=255) ccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAg > 2:715360/1‑150 (MQ=255) ccTGCGCCACTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAg > 1:501732/1‑150 (MQ=255) cTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGt < 2:446360/150‑1 (MQ=255) tGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTc > 2:1155886/1‑150 (MQ=255) tGCGCCAGTGGCGCAGGGATGCCAGTAAACCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCaa > 1:121336/1‑91 (MQ=255) tGCGCCAGTGGCGCAGGGATGCCAGTAAACCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCaa < 2:121336/91‑1 (MQ=255) cAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGccc > 1:231216/1‑150 (MQ=255) gTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGCCCGa < 2:452836/150‑1 (MQ=255) | TGGTATTCACCAAGTGTTTCCGACGATGACAGACGGGGAGCTACAAGCCTATCTGCTTGACCTCATGGAGCGGCGAGTAGGGTTGTGGGAGCACT‑ACAGCCAGCTGACGGGGCAGTTGGCGCGCCTGCGTCAGAGCCTGCGCCAGTGGCGCAGGGATGCCAGTAACCCACTGGACGCTTTACGCCGCCGTCGGGTCGCTACTGCCGTACGGCGAAGCTGGCGGCGCAAGATAACCGACGAGGCCGGGGACTACGCGCTGATCATCAGCGGAGAGCGTATCGGGAGTCTGCCCGA > NC_002947/1229409‑1229702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |