| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 141,785 | A→G | 5.1% | L21P (CTG→CCG) | algB ← | alginate biosynthesis transcriptional regulator AlgB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 141,785 | 0 | A | G | 5.1% | 245.9 / 2.0 | 78 | L21P (CTG→CCG) | algB | alginate biosynthesis transcriptional regulator AlgB |
| Reads supporting (aligned to +/- strand): ref base A (36/38); new base G (2/2); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.43e-01 | |||||||||||
GCACGTCGAGGCCGTTGTCTTCACCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGAAGGATTCTGTC > NC_002947/141636‑141929 | gCACGTCGAGGCCGTTGTCTTCACCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCa < 2:289946/150‑1 (MQ=255) gTTGTCTTCACCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTc < 2:17860/150‑1 (MQ=255) ttGTCTTCACCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCGGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCg < 1:385533/150‑1 (MQ=255) cTTCACCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCAt < 2:274823/150‑1 (MQ=255) cACCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATcca > 1:1333946/1‑150 (MQ=255) aCCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATccac < 2:251023/150‑1 (MQ=255) ccAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATccacca > 2:1241507/1‑150 (MQ=255) ccAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATccacca > 2:226623/1‑150 (MQ=255) ccAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATccacca > 1:1365432/1‑150 (MQ=255) gcAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGaa > 2:436786/1‑150 (MQ=255) gAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGc > 1:1295981/1‑149 (MQ=255) gAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGc < 2:1295981/149‑1 (MQ=255) ggAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCta > 2:1400157/1‑149 (MQ=255) gCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGtt < 2:113318/150‑1 (MQ=255) aTAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCGGGATcgc > 2:310600/1‑112 (MQ=255) aTAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCGGGATcgc < 1:310600/112‑1 (MQ=255) aTAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCttgtttgt > 1:210772/1‑150 (MQ=255) gTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTg < 2:354118/141‑1 (MQ=255) gTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTg > 1:354118/1‑141 (MQ=255) gTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTg > 2:1284852/1‑150 (MQ=255) gAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGc < 2:1062943/150‑1 (MQ=255) gAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCCTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGc < 2:821294/150‑1 (MQ=255) cTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAg > 1:1306744/1‑93 (MQ=255) cTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAg < 2:1306744/93‑1 (MQ=255) cTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTgg < 2:1408200/133‑1 (MQ=255) cTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTgg > 1:1408200/1‑133 (MQ=255) cTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTc < 1:226623/150‑1 (MQ=255) tGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTcc < 2:1333946/150‑1 (MQ=255) gTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCtgtg < 2:845517/150‑1 (MQ=255) tAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCtt < 1:995715/119‑1 (MQ=255) tAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCtt > 2:995715/1‑119 (MQ=255) tAGGGTTTCTACCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGc > 2:171683/1‑150 (MQ=255) aGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCt > 2:741489/1‑150 (MQ=255) cgctactgcctggaagacgagggctacagcgtggccacggcgaacagcgccgcccaggcagTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTcc > 1:378167‑M2/62‑150 (MQ=255) tCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAg < 1:205415/150‑1 (MQ=255) CCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTgg > 2:119415‑M1/1‑110 (MQ=255) CCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTgg < 1:119415‑M1/110‑1 (MQ=255) cggcgCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCt < 2:1365432/150‑1 (MQ=255) gcTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCtttat > 2:1259556/1‑150 (MQ=255) gcTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCtttat > 1:39869/1‑150 (MQ=255) cTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCGGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTg < 2:1210809/98‑1 (MQ=255) cTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCGGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTg > 1:1210809/1‑98 (MQ=255) gggctacagcgtggccacggcgaacagcgccgcccaggcagTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGc < 2:68631‑M2/68‑1 (MQ=255) gggctacagcgtggccacggcgaacagcgccgcccaggcagTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGc > 1:68631‑M2/42‑109 (MQ=255) gTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCtttattta > 2:883845/1‑150 (MQ=255) ttCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAg > 2:363749/1‑150 (MQ=255) gCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAgtgt < 2:1134700/150‑1 (MQ=255) ccGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCTATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGtgtg < 2:210772/150‑1 (MQ=255) cGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTgg < 1:1284852/150‑1 (MQ=255) cACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGaaaaa > 2:109531/1‑150 (MQ=255) cACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGaaaaa > 2:1222407/1‑150 (MQ=255) gCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAACCg < 1:1423885/150‑1 (MQ=255) cccTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGt > 1:627979/1‑150 (MQ=255) ccTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAgt > 1:636013/1‑129 (MQ=255) ccTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAgt < 2:636013/129‑1 (MQ=255) ccTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGtt > 2:1377790/1‑150 (MQ=255) ccTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGtt > 2:725066/1‑150 (MQ=255) cGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCa < 1:1222407/150‑1 (MQ=255) tCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATg > 1:100094/1‑150 (MQ=255) ttCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCg < 2:1399791/135‑1 (MQ=255) ttCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCg > 1:1399791/1‑135 (MQ=255) ttCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGt < 1:436786/150‑1 (MQ=255) ttCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGt > 1:12452/1‑150 (MQ=255) gcccaggcagTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGt < 2:378167‑M2/140‑1 (MQ=255) caggcagTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCaa > 2:563888‑M2/8‑150 (MQ=255) aggcagTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAAt > 2:976821‑M2/7‑150 (MQ=255) gcagTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTc > 2:240719‑M2/5‑150 (MQ=255) tAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGaa < 2:12452/150‑1 (MQ=255) tAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGaa < 2:1258576/150‑1 (MQ=255) tAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGaa < 1:171683/150‑1 (MQ=255) tAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGaa < 1:976821/150‑1 (MQ=255) tAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGaa < 1:240719/150‑1 (MQ=255) tAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGaa < 1:741489/150‑1 (MQ=255) aCGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGAAGGATTCt < 1:1259556/150‑1 (MQ=255) tGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGAAGGATTCTGTc < 1:363749/150‑1 (MQ=255) cgcAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTgg > 2:551273/1‑54 (MQ=255) cgcAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTgg < 1:551273/54‑1 (MQ=255) gcAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGAt > 2:1046262/1‑88 (MQ=255) gcAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGCGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGAt < 1:1046262/88‑1 (MQ=255) | GCACGTCGAGGCCGTTGTCTTCACCCAGGCGCAAATCGAGGAAGCATAGGTCGAACACCTGGCGTTGCAGTAGGGTTTCTGCCTGGGCGGCGCTGTTCGCCGTGGCCACGCTGTAGCCCTCGTCTTCCAGGCAGTAGCGGAACGTGCGCAGGATCGCGGACTCGTCATCCACCAGCAGAATTCGGCCTTGGTTGTCCTGGGCTGATTCCATTTCCTGTGCTCCTTAGGGAAAGATCTTTATTTAGTGTGGGAAAAATCGGGCAAGTTGCATGGTCAATTCTGAAGGATTCTGTC > NC_002947/141636‑141929 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |