| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,443,122 | A→T | 10.4% | intergenic (‑53/+123) | ghrB ← / ← PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,443,122 | 0 | A | T | 10.4% | 225.8 / 15.1 | 77 | intergenic (‑53/+123) | ghrB/PP_1262 | 2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (29/40); new base T (3/5); total (32/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.03e-01 | |||||||||||
GGGGTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATG > NC_002947/1442980‑1443268 | ggggTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGc > 2:814248/1‑150 (MQ=255) ggTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTc > 1:140692/1‑150 (MQ=255) gTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaa < 1:632228/150‑4 (MQ=255) gTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaa < 1:172369/150‑4 (MQ=255) gCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACgg > 2:287072/1‑150 (MQ=255) tCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGgc > 2:734081/1‑150 (MQ=255) tCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGgc > 1:1398314/1‑150 (MQ=255) tCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGGGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGgc > 2:337195/1‑150 (MQ=255) ttGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGt < 1:814248/150‑1 (MQ=255) gTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACggg < 1:142929/135‑1 (MQ=255) gTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACggg > 2:142929/1‑135 (MQ=255) tCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaa > 1:1232654/1‑125 (MQ=255) tCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaa < 2:1232654/128‑4 (MQ=255) cTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGACAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGt < 2:670049/150‑1 (MQ=255) ttGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTa > 2:5453/1‑150 (MQ=255) tgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCACTCCTACGGGGGGGCGCGGTGCCtt < 1:1159750/143‑1 (MQ=255) tgcAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCACTCCTACGGGGGGGCGCGGTGCCtt > 2:1159750/1‑143 (MQ=255) gcAGGCGTTCGGCCATGGCCGGGGTGATACGGCGGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGc < 1:1425475/150‑1 (MQ=255) aGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCCACTTCTCTGCAATGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCgg < 1:1240858/150‑1 (MQ=255) aGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCgg < 2:763226/150‑1 (MQ=255) gTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaag > 2:568324/1‑112 (MQ=255) gTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaag < 1:568324/116‑5 (MQ=255) gTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCtt > 2:1099292/1‑150 (MQ=255) ttCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaa > 1:730141/1‑111 (MQ=255) ttCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCTTGCCCGcgaa < 2:730141/114‑4 (MQ=255) tCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGc < 1:709480/150‑1 (MQ=255) ggCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGccc < 1:734081/150‑1 (MQ=255) tGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGaa < 2:140692/150‑1 (MQ=255) gCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGCCCC‑TTCGCGGGCAAGCCCGCTCCTACAAGGCACCGCGCCCCCCCGTAGGAGCGGGCTTGCCCGCGAAgg < 2:615565/150‑1 (MQ=18) cGGGGTGATACGGCTGAAGGCCAGGGCGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGGTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTg < 1:889186/150‑1 (MQ=255) cGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTg > 2:1392030/1‑150 (MQ=255) gggTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGcc < 1:655620/150‑1 (MQ=255) ggTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACggg < 1:1201664/105‑1 (MQ=255) ggTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACggg > 2:1201664/1‑105 (MQ=255) ggTGATACGGCGGAGGGCAAGGAGGGTTTTTTTCAGCGGGCAACTTCTCTGTAGGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCCCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTGCCCCGCGAAGGTGCCg < 2:1398314/150‑1 (MQ=255) cGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAgg > 1:52388/1‑150 (MQ=255) ggCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGc < 2:511914/150‑1 (MQ=255) agggCCGGGAGGTTTTTTTTCTTCGGCCACTTTCTCGGAAGGGGGGGGGGGGGCTG‑GCGGGGCCCTTTCGCGGGCAAGCCCGCTCTTCGGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAAt < 2:1023715/148‑1 (MQ=255) gCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCaa < 1:172343/150‑1 (MQ=255) ccAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt < 1:1042639/150‑1 (MQ=255) cAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACa < 1:894908/137‑1 (MQ=255) cAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACa > 2:894908/1‑137 (MQ=255) ggACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt < 1:1277002/147‑1 (MQ=255) ggACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt > 2:1277002/1‑147 (MQ=255) ggACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGATATTGGGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGt < 1:1156114/150‑1 (MQ=255) gACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAg < 2:704669/123‑1 (MQ=255) gACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAg > 1:704669/1‑123 (MQ=255) gACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGtt > 1:336480/1‑150 (MQ=255) ggTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCtt > 2:614234/1‑96 (MQ=255) ggTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCtt < 1:614234/96‑1 (MQ=255) cTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCAGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAAc < 1:337195/150‑1 (MQ=255) tttttCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCt > 1:375965/1‑69 (MQ=255) tttttCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCt < 2:375965/69‑1 (MQ=255) ggCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTc < 1:287072/150‑1 (MQ=255) ttCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGcccc > 1:648290/1‑150 (MQ=255) ttCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCGACCATTGTCCGcccc > 2:994295/1‑150 (MQ=255) tctcTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt < 2:266086/122‑1 (MQ=255) tctcTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt > 1:266086/1‑122 (MQ=255) aGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTgca < 2:496974/150‑1 (MQ=255) aGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTgca < 2:336480/150‑1 (MQ=255) tGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCttt < 1:994295/150‑1 (MQ=255) ggCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTa < 1:1099292/150‑1 (MQ=255) cTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt > 2:571982/1‑96 (MQ=255) cTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAAt < 1:571982/96‑1 (MQ=255) tGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGcgcg > 2:1357364/1‑41 (MQ=255) tGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGcgcg < 1:1357364/41‑1 (MQ=255) gTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTg < 2:165302/47‑1 (MQ=255) gTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTg > 1:165302/1‑47 (MQ=255) tCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTg > 2:492554/1‑126 (MQ=255) tCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTg < 1:492554/126‑1 (MQ=255) tCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCa < 1:865947/150‑1 (MQ=255) c‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACCGGCGACAGCAAGGGTTAGCAACGTACGAGGTTCCTCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCa > 2:870743/1‑150 (MQ=38) c‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCa < 2:648290/150‑1 (MQ=255) tCGCTGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCAcc > 2:1007377/1‑150 (MQ=255) gggCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGa > 2:1071546/1‑149 (MQ=255) gggCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGa < 1:1071546/149‑1 (MQ=255) ggCAAGCACCCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCAGCGAATGAGCTGCGACATGCTAAAGCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATg < 1:1390944/150‑1 (MQ=255) | GGGGTTGGGCAGGATCACGTTGAAGTCTTGCTGCAGGCGTTCGGCCATGGCCGGGGTGATACGGCTGAAGGCCAGGACGGTCTTTTTCATCGGGCAACTTCTCTGCAAGGCGGGGTGGGGCTGTGCTGGTCCC‑TTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTGCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATG > NC_002947/1442980‑1443268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |