| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,563,870 | A→C | 5.1% | intergenic (+94/+28) | PP_1372 → / ← pitB | hypothetical protein/phosphate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,563,870 | 0 | A | C | 5.1% | 230.8 / 4.1 | 81 | intergenic (+94/+28) | PP_1372/pitB | hypothetical protein/phosphate transporter |
| Reads supporting (aligned to +/- strand): ref base A (39/37); new base C (2/2); total (41/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01 | |||||||||||
GCGGCAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCA > NC_002947/1563722‑1564007 | gcggcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTCCATAAGATCGGAAGAGCACACG‑TATGAACAAGGTGGCGTAGGCATAACGGCTATAAAAAAGGCGCCCGAg > 1:878463/1‑150 (MQ=255) cggcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATATACTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAgg < 2:298366/150‑1 (MQ=255) gcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGgc > 1:1268721/1‑150 (MQ=255) gTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGTGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCTCGGGCGcc < 2:1314957/150‑1 (MQ=255) gTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTCGAACTAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGcc > 1:1157827/1‑150 (MQ=255) gTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGc < 2:1139485/150‑1 (MQ=255) gTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGc < 2:1092320/150‑1 (MQ=255) tGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCgg < 1:369444/150‑1 (MQ=255) gTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttc < 2:821936/132‑1 (MQ=255) gTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttc > 1:821936/1‑132 (MQ=255) gTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACt > 2:1148022/1‑150 (MQ=255) cgcttgtAGGGGGCGAAAAAAGGTAGTCGTACGGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGTTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑a < 2:112680/144‑1 (MQ=255) cGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑a < 1:1216412/150‑1 (MQ=255) cGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑a < 2:73201/150‑1 (MQ=255) cGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑a < 1:48820/150‑1 (MQ=255) ttAGGGGGCGTGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACACGGTGGCGTAGGCATAACGGCTAGGAAAAAGGCGCCCGAGGGCGCCGTCATTCATTGCGGTGTCACGC‑AGCCaa < 2:257827/150‑1 (MQ=255) ttAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACATGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCaa > 1:786857/1‑150 (MQ=255) gCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCttt < 1:1148022/150‑1 (MQ=255) gAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCttt < 1:622763/146‑1 (MQ=255) gAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCttt > 2:622763/1‑146 (MQ=255) gAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGAc > 1:223606/1‑150 (MQ=255) gAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGAc > 1:609938/1‑150 (MQ=255) gAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGAAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGAc < 2:297510/150‑1 (MQ=255) aaaGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACATGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACgc < 2:786857/150‑1 (MQ=255) tAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACgccagcc > 2:853838/1‑150 (MQ=255) ttCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACgccagcca > 1:140300/1‑146 (MQ=255) ttCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACgccagcca < 2:140300/146‑1 (MQ=255) gccgcgccATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGgcgc > 2:768768/1‑91 (MQ=255) gccgcgccATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGgcgc < 1:768768/91‑1 (MQ=255) cgcgccATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAggccggcc > 1:763990/1‑150 (MQ=255) ccATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCa > 1:1252533/1‑150 (MQ=255) cATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACgccagc > 2:440412/1‑130 (MQ=255) cATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACgccagc < 1:440412/130‑1 (MQ=255) cATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAg > 1:590932/1‑150 (MQ=255) tACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCGGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGc > 2:984487/1‑150 (MQ=255) ccTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCa > 2:414431/1‑150 (MQ=255) ccTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCa > 2:335115/1‑150 (MQ=255) ttGGTAGCACAAGC‑CTTCGCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATc > 1:49242/1‑150 (MQ=255) ttGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATc < 2:1268721/150‑1 (MQ=255) ttGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTCGTCGTTAGTCAGAACAGGCCGGCCGCCAGGCCCATc < 1:984487/150‑1 (MQ=255) ttGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTGCCGGCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATc > 1:738038/1‑150 (MQ=255) tAGCACAAGC‑CCGATCGGGCAAAAAATAACTTTGCGGATGCATAACGGCTATGCAAAAGGTGTCCGTAGAATGCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGagg < 1:386112/150‑1 (MQ=255) gCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAAt > 1:682588/1‑101 (MQ=255) gCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAAt < 2:682588/101‑1 (MQ=255) gCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggca < 1:853838/150‑1 (MQ=255) gCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCAGATGCAGAACGGCGAGGAAAAAAGCACACGAGGGCGCC‑CCAGTCACTTCCAAGGATCTCGTATGAAGGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggca > 1:1391797/1‑150 (MQ=255) cacaAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcag < 2:1391797/150‑1 (MQ=255) acaAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcagg > 1:1163055/1‑150 (MQ=255) gC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTATTTTGCATGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGcaggcagg < 2:49242/150‑1 (MQ=255) gCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCt < 2:753057/63‑1 (MQ=255) gCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCt > 1:753057/1‑63 (MQ=255) cTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAg < 1:414431/150‑1 (MQ=255) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcagg < 2:1399470/136‑1 (MQ=255) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcagg > 1:1399470/1‑136 (MQ=255) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGa > 1:353593/1‑147 (MQ=255) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGa < 2:353593/147‑1 (MQ=255) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGAccc > 2:351359/1‑150 (MQ=255) cAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCa > 2:403825/1‑150 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCaa < 2:1364718/82‑1 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCaa > 1:1364718/1‑82 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt < 2:763990/150‑1 (MQ=255) cAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcaggc < 1:1310055/129‑1 (MQ=255) cAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcaggc > 2:1310055/1‑129 (MQ=255) cAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt > 1:179411/1‑144 (MQ=255) cAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt < 2:179411/144‑1 (MQ=255) aaGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCcagca < 2:223606/150‑1 (MQ=255) aaGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCcagca < 2:1252533/150‑1 (MQ=255) gCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATgg > 2:806218/1‑150 (MQ=255) cGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCGTTCATTCATTGCGGTGTCACTC‑ATCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAAGCAGGGTCAGGACCCATGCCAGCAGGAtaga > 2:576264/1‑147 (MQ=255) gTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGtt > 2:1025687/1‑150 (MQ=255) gCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTca > 2:1092308/1‑150 (MQ=255) aTAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTcaca < 1:403825/150‑1 (MQ=255) aTAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTcaca < 2:590932/150‑1 (MQ=255) aCGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTg > 1:860978/1‑150 (MQ=255) cGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTgc < 2:860978/150‑1 (MQ=255) ggCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTgcc > 2:723549/1‑150 (MQ=255) tGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCtt < 2:878463/150‑1 (MQ=255) aatgaaGGCGCCCTCGGGCGCCTT‑TTTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGc > 2:1330712/5‑150 (MQ=255) aaaaGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCa > 1:338280/1‑150 (MQ=255) aGGCGCCCTCGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGagg < 2:1211597/93‑1 (MQ=255) aGGCGCCCTCGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGagg > 1:1211597/1‑93 (MQ=255) | GCGGCAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGC‑CCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTC‑AGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCA > NC_002947/1563722‑1564007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |