| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 197,551 | C→G | 11.1% | T1019T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 197,551 | 0 | C | G | 11.1% | 232.5 / 21.5 | 90 | T1019T (ACC→ACG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (39/41); new base G (5/5); total (44/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.70e-01 | |||||||||||
GACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCG > NC_002947/197404‑197692 | gACCAACATCACCGCCTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCGGTCGGTCACCGAAGGCGGCGTGATCTCCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCAt < 2:251622/150‑1 (MQ=11) cACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTAc < 1:84263/150‑1 (MQ=39) cGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCg > 1:1024702/1‑150 (MQ=39) aaCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGaa < 1:1333570/150‑1 (MQ=39) cTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCgg < 1:219223/150‑1 (MQ=38) tCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGc < 1:1271707/150‑1 (MQ=39) gTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAg > 2:1275982/1‑150 (MQ=38) gTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAg > 2:880405/1‑150 (MQ=39) gCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAg > 1:477249/1‑150 (MQ=39) ccaccaCCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAgg < 1:556961/150‑1 (MQ=39) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGc > 1:970477/1‑150 (MQ=39) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGc > 1:299798/1‑150 (MQ=39) accGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCCGc < 1:1424417/150‑1 (MQ=255) ccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCg > 2:1178947/1‑150 (MQ=38) cccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGAtt > 1:199751/1‑150 (MQ=39) ccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGTA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGAttt < 2:1252910/150‑1 (MQ=255) cTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTc < 1:880405/150‑1 (MQ=39) tGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTcc > 2:1353775/1‑150 (MQ=39) gACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCa < 1:463783/150‑1 (MQ=39) gCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGAcc < 1:677178/150‑1 (MQ=38) aGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGa > 2:293746/1‑110 (MQ=40) aGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGa < 1:293746/110‑1 (MQ=255) tCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt < 2:477249/150‑1 (MQ=39) gTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAc < 2:299798/150‑1 (MQ=38) gTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAc > 2:457917/1‑150 (MQ=39) gTCACCGAAGGCGGCGTGATCACCTACACCGAGATAATGAGAATATGC‑GCAAAATCGCCTGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTCAAGCCGGC‑AAGACACAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAc < 2:666463/150‑1 (MQ=11) cGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCa < 2:1295887/129‑1 (MQ=40) cGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCa > 1:1295887/1‑129 (MQ=40) gcggcgTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTac < 2:1252055/146‑1 (MQ=39) gcggcgTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTac > 1:1252055/1‑146 (MQ=39) ggcgTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt < 2:623152/135‑1 (MQ=40) ggcgTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAAt > 1:623152/1‑135 (MQ=39) ggcgTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACaacaac < 2:898791/150‑1 (MQ=38) gTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGt < 2:970477/150‑1 (MQ=38) gATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTc < 1:871360/150‑1 (MQ=38) tCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGc < 1:996438/104‑1 (MQ=40) tCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGa > 1:41744/1‑150 (MQ=38) tCACATACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGc > 2:996438/1‑104 (MQ=255) cTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGc > 1:909791/1‑81 (MQ=40) cTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGc < 2:909791/81‑1 (MQ=40) acacCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCa > 2:705435/1‑150 (MQ=40) ccGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGaa > 2:311257/1‑74 (MQ=255) ccGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGaa < 1:311257/74‑1 (MQ=255) cGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGaa > 2:558185/1‑117 (MQ=40) cGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGaa < 1:558185/117‑1 (MQ=255) cGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGt > 1:797845/1‑150 (MQ=255) cGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGt > 1:633885/1‑150 (MQ=25) gTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTc > 2:950638/1‑150 (MQ=255) tGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCg > 1:1061629/1‑150 (MQ=39) tGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCg > 1:34431/1‑150 (MQ=18) gAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCga > 1:600921/1‑150 (MQ=17) aGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCgag > 2:332697/1‑150 (MQ=39) tCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGc > 1:1159107/1‑150 (MQ=39) cTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCca < 2:34431/150‑1 (MQ=17) cTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATCTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCca < 1:415214/150‑1 (MQ=18) cccAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCcaca > 2:1253060/1‑149 (MQ=17) cccAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCcaca < 1:1253060/149‑1 (MQ=17) cAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGc < 1:950638/150‑1 (MQ=39) aGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTAACCATCGAGAACGCCACAGGCg < 1:994841/150‑1 (MQ=11) aGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCg < 1:1178947/150‑1 (MQ=17) gACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCgg < 2:633885/150‑1 (MQ=17) cGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAAtt > 2:1206792/1‑150 (MQ=11) cGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACt > 1:722131/1‑113 (MQ=39) cGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACt < 2:722131/113‑1 (MQ=39) gtcaCCGTGACACTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTATACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc < 2:352230/147‑1 (MQ=255) tAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCg > 2:8898/1‑150 (MQ=11) tAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGACAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCg > 1:819924/1‑150 (MQ=11) tAACCGTGACCCTGTCCAACGGACAAACCATTACCGTTGGAGCCGGC‑AAGACCCAGGGCAGCGTCGCTTTTCAGACCCCGGCGAATGACGTCTACAACAACGTTTCGACTGTAAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCg > 1:352230/1‑150 (MQ=11) aaCCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 1:332697/150‑1 (MQ=35) aaCCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 1:1411385/150‑1 (MQ=35) aaCCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 1:705435/150‑1 (MQ=35) aCCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAg < 1:1206792/150‑1 (MQ=255) ccGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGc < 2:1024655/150‑1 (MQ=255) gTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTGACCATCGAGAACGCCACAGGCGGTAATTTCGAGCaa > 1:1142836/1‑150 (MQ=255) gTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCaa < 1:522892/150‑1 (MQ=255) gTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGAAAAC‑CAAACACAATGCATCGTCGACTTCCAGATCCGGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTTGAGCaa > 1:603698/1‑150 (MQ=11) gTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCaa < 2:41744/150‑1 (MQ=32) cccTGTCCAACGGCCAAACCATCACCGTTGAAGCCGGC‑AACACCCAGGGCAGCGTCGATTTCGAGACCACGGCGAATGACGCCTAAAACAACGGTTAAACTGTCAGCGTCACCATCCAAAAAGCCAAAGGCGGTAATTTCGAGCAACtta > 2:447409/1‑148 (MQ=11) ccTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGACGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGAc > 2:327716/1‑150 (MQ=255) ccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGc > 2:693961/1‑130 (MQ=33) ccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGc < 1:693961/130‑1 (MQ=33) ccTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGAc > 2:1232798/1‑150 (MQ=32) tGTCCAACGGCCAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGAccc < 2:1099825/150‑1 (MQ=255) tGTCCAACGGCCAAACCAGTACCGTAGAACCCGGCGAAGGCCAAGGG‑AGCGTCTAGTTGCATAGCTCGCCGAATGACGCGTACCACTACGAATCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTCCGAGCAACTGAccc > 2:1077989/1‑150 (MQ=2) cAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCCTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGaa < 2:1033929/150‑1 (MQ=17) cAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGaa > 1:84818/1‑150 (MQ=32) aaCGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAAc < 1:1275982/150‑1 (MQ=33) aCGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAAcc < 1:1232798/150‑1 (MQ=34) gggcAAACGATTACCGTTGAAGCCGGC‑AAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATAGAGAACGCCACAGGCGGTAATTTCGAGCAACCGACCCCGAACCCg > 1:441502/4‑150 (MQ=11) ggCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCg > 2:1154305/1‑150 (MQ=35) | GACCACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCA‑ATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGC‑AAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCG > NC_002947/197404‑197692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |