Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 206,064 T→A 7.8% L3857Q (CTG→CAG)  PP_0168 → putative surface adhesion protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947206,0640TA 7.8% 183.5 / 4.9 64L3857Q (CTG→CAG) PP_0168putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base T (31/27);  new base A (3/2);  total (35/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGTCAGCACGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGT  >  NC_002947/205915‑206212
                                                                                                                                                     |                                                                                                                                                    
ggTCAGCACGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCt                                                                                                                                                      >  1:1099504/1‑150 (MQ=255)
   tggctcGTCGGTAACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAAAGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGt                                                                                                                                                   >  1:1359406/6‑150 (MQ=255)
   cAGCACGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGt                                                                                                                                                   <  2:137065/150‑1 (MQ=39)
    aGCACGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTc                                                                                                                                                  <  2:1165527/150‑1 (MQ=255)
    aGCACGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTc                                                                                                                                                  <  2:250224/150‑1 (MQ=255)
       aCGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGGCACCATCACAGCCGACCAGACGTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCAGCTGGCGCACGACCTGGTCGTg                                                                                                                                               >  2:47332/1‑150 (MQ=255)
        cGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCAGGTCGTGa                                                                                                                                              <  2:76741/150‑1 (MQ=255)
         gTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGAACTTCCCCGTGCACGTAAACCAGTTGCTGGCTCATGTCCTGGTCTTGat                                                                                                                                             <  2:797867/150‑2 (MQ=11)
           cGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGAccc                                                                                                                                           <  2:236369/150‑1 (MQ=255)
             gTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTg                                                                                                                                         >  2:1198613/1‑150 (MQ=40)
              ttACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGAAGTTGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGa                                                                                                                                        <  1:373680/150‑1 (MQ=255)
                  cgacgaGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGcaa                                                                                                                                    >  1:221201/1‑150 (MQ=255)
                   gacgaGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGCTCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGcaac                                                                                                                                   >  2:1378112/1‑150 (MQ=255)
                             gTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAgg                                                                                                                         <  2:1359406/150‑1 (MQ=255)
                                   cGGGCAACGAAGGCGACCTGGTCAAAAATCCGATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCa                                                                                                                   >  1:749288/1‑150 (MQ=14)
                                    gggCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCAt                                                                                                                  >  1:24849/1‑150 (MQ=255)
                                      gCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTc                                                                                                                                                  <  2:971965/116‑1 (MQ=255)
                                      gCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTc                                                                                                                                                  >  1:971965/1‑116 (MQ=255)
                                        aaCGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAg                                                                                                              >  2:1370080/1‑150 (MQ=255)
                                        aaCGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAg                                                                                                              <  2:24849/150‑1 (MQ=255)
                                        aaCGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAg                                                                                                              <  2:1099504/150‑1 (MQ=255)
                                         aCGAAGGCGACCTGGTCAAGGTCACGATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGAGCCTGGGCAACAACGCCCAGGTCACCATCAAgg                                                                                                             >  1:650386/1‑150 (MQ=255)
                                           gAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGcc                                                                                                           >  1:1373573/1‑150 (MQ=255)
                                            aaGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCg                                                                                                          <  1:661140/150‑1 (MQ=255)
                                                  aCCTGATCAAGGTCACCATCACAGCCGACCAGACTTCGGTAGCCGGCAACATCAAACCGAGCTTCACCGTGCACGTAAACCCGCCGCTGGCCCACGACCTGGTCGTGACGCTGAGCAACAACGCCCAGGTCACCAACAAGCCCCGCgaga                                                                                                    >  2:1089307/1‑150 (MQ=11)
                                                    cTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGAcc                                                                                                  >  2:130785/1‑150 (MQ=255)
                                                     tGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCaa                                                                                                               <  2:1061640/136‑1 (MQ=255)
                                                     tGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCaa                                                                                                               >  1:1061640/1‑136 (MQ=255)
                                                     tGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCa                                                                                                 <  1:130785/150‑1 (MQ=255)
                                                       gTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGATCAACAACGCCCAGTCCACCATCAAGGCCGGCGAGACCAgc                                                                                               >  2:108825/1‑150 (MQ=255)
                                                           aGGCCACCATAACAGCCGACCAGACTTCGGTGGACGAGAAGGTCAAACCGATCGTCACCGTGCACGTAAACCAGCCGCTGGCGCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACAATCAAGGCCGGCGAGACCAgcgcgc                                                                                           <  2:182774/150‑1 (MQ=14)
                                                            ggTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACTGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCaacaac                                                                                                                                >  2:555685/1‑112 (MQ=255)
                                                            ggTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACTGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCaacaac                                                                                                                                <  1:555685/112‑1 (MQ=255)
                                                               cACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCCTAAACCCCAGTCATGAACGTTAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATa                                                                                       >  1:168577/1‑150 (MQ=14)
                                                                           cGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTgc                                                                           <  1:18279/150‑1 (MQ=255)
                                                                                aGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAg                                                                      >  2:265251/1‑150 (MQ=255)
                                                                                  aCTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCCCACGAACTGGTCATGTTCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGc                                                                    <  1:172993/150‑1 (MQ=14)
                                                                                       ggTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGa                                                               <  1:1198613/150‑1 (MQ=255)
                                                                                                 aaCGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCt                                                          >  1:533991/1‑145 (MQ=255)
                                                                                                 aaCGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCt                                                          <  2:533991/145‑1 (MQ=255)
                                                                                                    gTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGcc                                                                                                           <  1:1311437/93‑1 (MQ=255)
                                                                                                    gTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGcc                                                                                                           >  2:1311437/1‑93 (MQ=255)
                                                                                                        aaCCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTg                                              >  2:538588/1‑150 (MQ=255)
                                                                                                           cGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGcc                                           >  1:1285439/1‑150 (MQ=40)
                                                                                                            gATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCa                                          >  2:382507/1‑150 (MQ=40)
                                                                                                                ttCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATc                                      <  1:1370080/150‑1 (MQ=38)
                                                                                                                ttCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCAGGTCGTGa                                                                                                                                              <  1:1060722/46‑1 (MQ=255)
                                                                                                                ttCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCAGGTCGTGa                                                                                                                                              >  2:1060722/1‑46 (MQ=255)
                                                                                                                 tCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCa                                     <  1:732285/150‑1 (MQ=39)
                                                                                                                  cACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAg                                    >  1:1336018/1‑150 (MQ=38)
                                                                                                                      gTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAgg                                                                     >  1:660779/1‑113 (MQ=255)
                                                                                                                      gTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAgg                                                                     <  2:660779/113‑1 (MQ=40)
                                                                                                                      gTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCt                                 >  1:548274/1‑149 (MQ=39)
                                                                                                                      gTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCt                                 <  2:548274/149‑1 (MQ=38)
                                                                                                                      gTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTg                                >  1:936354/1‑150 (MQ=39)
                                                                                                                       tGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTgg                               <  2:168577/150‑1 (MQ=38)
                                                                                                                                       gCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCtgt               >  2:868254/1‑150 (MQ=38)
                                                                                                                                        cTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCtgtg              >  1:843671/1‑150 (MQ=38)
                                                                                                                                         agggtCACGACCAGGTCGTGAGCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTgg             >  2:1024627/5‑150 (MQ=255)
                                                                                                                                           gCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGAt           <  1:538588/150‑1 (MQ=38)
                                                                                                                                            gtCACGACCAGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATg          >  2:1002257/2‑150 (MQ=37)
                                                                                                                                             tCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGt         >  1:394694/1‑150 (MQ=35)
                                                                                                                                                 gACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCt                                 >  1:1141153/1‑122 (MQ=33)
                                                                                                                                                 gACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCt                                 <  2:1141153/122‑1 (MQ=33)
                                                                                                                                                    cTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGTGCATCACGTGTGCTGTGGATGTAGACGGt  >  2:75027/1‑150 (MQ=21)
                                                                                                                                                     |                                                                                                                                                    
GGTCAGCACGTCGGTTACCGACGAGCCAGGTACGCCGGGCAACGAAGGCGACCTGGTCAAGGTCACCATCACAGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGATCTTCACCGTGCACGTAAACCAGCCGCTGGCTCACGACCTGGTCGTGACCCTGAGCAACAACGCCCAGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAAGGCGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGT  >  NC_002947/205915‑206212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: