Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,283,014 A→T 5.8% W282R (TGG→AGG)  PP_2011 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,283,0140AT 5.8% 205.9 / 3.4 69W282R (TGG→AGG) PP_2011hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (33/32);  new base T (2/2);  total (35/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.69e-01

CAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTGCGGGT  >  NC_002947/2282871‑2283163
                                                                                                                                                |                                                                                                                                                     
cAGGCGACATCAGTTACCGGACAGATAGGGCCAGACATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACGATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGc                                                                                                                                                 >  1:252645/1‑150 (MQ=255)
   gCGACATCAGTTACCGGGCAGATAGGGCCATTCATGACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCCGCAACTCCACCGTTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCaaa                                                                                                                                              <  2:760893/150‑1 (MQ=255)
    cGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAAc                                                                                                                                             <  1:582993/150‑1 (MQ=255)
        aTCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCt                                                                                                                                         >  2:333411/1‑150 (MQ=255)
                ccGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGc                                                                                                                                 <  1:333411/150‑1 (MQ=255)
                  gggCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCa                                                                                                                               <  2:846027/150‑1 (MQ=255)
                      agagagGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCAc                                                                                                                           <  1:296961/150‑1 (MQ=255)
                       gATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACAATCGGCATCAGGCACCATTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACt                                                                                                                          >  1:886314/1‑150 (MQ=255)
                        aTAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTc                                                                                                                         >  2:796994/1‑150 (MQ=255)
                             gCCAGTAATCACCCACCAGAAACACGCGTTCTTCCTCCTGCCAGGCACCATCGGAATCAGTCACCAATCGTACCACCAAGTGCGCCGGTCC‑CTGCTGCTCCACCACATGCATCCAGGCTGCAAACCGCTCCGCCTGCCCGCCCTCACCTg                                                                                                                    >  2:5510/1‑150 (MQ=255)
                                  tcatcaCCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTcc                                                                                                               >  2:482016/1‑150 (MQ=255)
                                    atcaCCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCAc                                                                                                             >  2:387223/1‑150 (MQ=255)
                                    atcaCCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCAc                                                                                                             <  1:185198/150‑1 (MQ=255)
                                    atcaCCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTACCCTGACTacac                                                                                                             >  2:865487/1‑150 (MQ=255)
                                     tcaCCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCTGGCTGCatg                                                                                                                                              >  2:805702/1‑114 (MQ=255)
                                     tcaCCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCTGGCTGCatg                                                                                                                                              <  1:805702/116‑3 (MQ=255)
                                     tcaCCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCAcc                                                                                                            >  1:225424/1‑150 (MQ=255)
                                         ccaccaGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTG                                                                                                        >  1:1327072‑M1/1‑150 (MQ=255)
                                          caccaGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTACGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGC                                                                                                       >  2:1062962‑M1/1‑150 (MQ=255)
                                           accaGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCATGCCAGCACTCACCTGACTCCACCCTTGCC                                                                                                      >  2:679160‑M1/1‑150 (MQ=255)
                                            ccaGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCag                                                                                                     <  2:1327072‑M1/150‑3 (MQ=255)
                                                    acCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCgccagc                                                                                             >  1:1192484/1‑150 (MQ=255)
                                                      ccGTTCTGCCTCCGGCCAGTCACCAGCGGCATCAGGCACCAGTCGTACAAATCCGTCAGATTGAGCACGGTTTCT‑CATCACATGCACCCAGTCTGCAAACTGCTCTGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCgccagcca                                                                                           <  1:679160/150‑1 (MQ=255)
                                                             gCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCtggctggtgccggcaagg                                                                                    <  1:1225387‑M1/150‑19 (MQ=255)
                                                               ctcctGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCg                                                                                  >  1:185063/1‑150 (MQ=255)
                                                                tcctGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGc                                                                                 >  1:793816/1‑150 (MQ=255)
                                                                  ctGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCtggctggcgccggcaagggtgga                                                                               <  1:865487‑M1/150‑24 (MQ=255)
                                                                  ctGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTg                                                                               >  1:70257/1‑150 (MQ=255)
                                                                   tGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTc                                                                                                                                        <  2:1100989/92‑1 (MQ=255)
                                                                   tGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTc                                                                                                                                        >  1:1100989/1‑92 (MQ=255)
                                                                      cAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGc                                                                           >  2:1153682/1‑150 (MQ=255)
                                                                       aGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCg                                                                          >  1:665535/1‑150 (MQ=255)
                                                                         gCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCTGGCTGc                                                                                                                                                 >  1:1360627/1‑77 (MQ=255)
                                                                         gCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCTGGCTGc                                                                                                                                                 <  2:1360627/77‑1 (MQ=255)
                                                                         gCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGt                                                                        >  1:820568/1‑150 (MQ=255)
                                                                         gCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGt                                                                        >  1:275434/1‑150 (MQ=255)
                                                                         gCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGt                                                                        >  1:495215/1‑150 (MQ=255)
                                                                            ccATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGc                                                                     <  2:989756/150‑1 (MQ=255)
                                                                              aTCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCa                                                                   >  2:1022914/1‑150 (MQ=255)
                                                                                cGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAAc                                                                 >  2:266528/1‑150 (MQ=255)
                                                                                  gCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGc                                                               <  1:306089/150‑1 (MQ=255)
                                                                                    aTCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTc                                                             <  1:482016/150‑1 (MQ=255)
                                                                                    aTCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTc                                                             <  2:153264/150‑1 (MQ=255)
                                                                                         gCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACAGGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCt                                                        <  2:252645/150‑1 (MQ=255)
                                                                                           aCCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCCGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCg                                                      <  1:796994/150‑1 (MQ=255)
                                                                                           aCCAGTCGTACCAGCAAGTGCGCCGGTAC‑CTACTGCTCTACCACAGTCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCg                                                      <  1:317956/150‑1 (MQ=255)
                                                                                            ccAGTCCTACCAGCAAGTTGGCCGGTGC‑CTGGTGCTCCAGCACATGCAGCCAGGCGCGAAACTGCTCCGCCTGCCAGCCCTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCgg                                                     <  2:670986/150‑1 (MQ=255)
                                                                                               gTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTg                                                                               >  1:459857/1‑121 (MQ=255)
                                                                                               gTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTg                                                                               <  2:459857/121‑1 (MQ=255)
                                                                                                  gTACCAGCAAGTGCGCCGGTGC‑CTACTGATACAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCa                                               <  2:665535/150‑1 (MQ=255)
                                                                                                    aCCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCAcc                                             <  2:275434/150‑1 (MQ=255)
                                                                                                        gCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGt                                         <  2:495215/150‑1 (MQ=255)
                                                                                                          aaGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTcc                                       <  2:1295888/150‑1 (MQ=255)
                                                                                                             tGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCccgc                                    >  2:358826/1‑150 (MQ=255)
                                                                                                              gcgcCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCccgcc                                   <  1:925840/150‑1 (MQ=255)
                                                                                                                    gTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCTGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGaa                             <  2:195204/150‑1 (MQ=255)
                                                                                                                      gC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGc                           >  1:1135907/1‑150 (MQ=255)
                                                                                                                          tgctgcTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAg                        >  2:645344/1‑150 (MQ=255)
                                                                                                                             tgctCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGcc                                                                    >  2:240193/1‑103 (MQ=255)
                                                                                                                             tgctCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGcc                                                                    <  1:240193/103‑1 (MQ=255)
                                                                                                                             tgctCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAgcgc                     <  2:1135907/150‑1 (MQ=255)
                                                                                                                              gctCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGcc                    <  1:645344/150‑1 (MQ=255)
                                                                                                                                  cAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCtggctggcgccggcaagg                                                                                    <  2:193622‑M1/82‑19 (MQ=255)
                                                                                                                                  cAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCtggctggcgccggcaagg                                                                                    >  1:193622‑M1/1‑64 (MQ=255)
                                                                                                                                    gCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTccc                                      >  2:1056994/1‑126 (MQ=255)
                                                                                                                                    gCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTccc                                      <  1:1056994/126‑1 (MQ=255)
                                                                                                                                          gCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCTGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGCAAATGtt        >  1:800084/1‑150 (MQ=255)
                                                                                                                                            aGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTGc      <  1:1153682/150‑1 (MQ=255)
                                                                                                                                            aGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCAGCCCCAGCGGTTGCCAACGCTCGCACTAGGACATCACTGACTTCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTgg      >  1:805163/1‑149 (MQ=255)
                                                                                                                                                aGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTGCGGGt  >  1:336254/1‑150 (MQ=255)
                                                                                                                                                |                                                                                                                                                     
CAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGC‑CTGCTGCTCCAGCACATGCAGCCAGGCTGCAAACTGCTCCGCCTGCCAGCACTCACCTGACTCCACCCTTGCCGGCGCCAGCCAGGCATGCCGCTGCAGCGGTTGCCAACGCTCGCCCTCGGCCATCACCCAGTCCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTGCGGGT  >  NC_002947/2282871‑2283163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑