Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,745,132 G→A 5.5% D210N (GAT→AAT)  PP_2399 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,745,1320GA 5.5% 217.8 / 2.2 73D210N (GAT→AAT) PP_2399hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (33/36);  new base A (2/2);  total (35/38)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01

CCAACGGCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCC  >  NC_002947/2744985‑2745281
                                                                                                                                                   |                                                                                                                                                     
ccAACGGCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGGTGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCCGATGCAGACATAGCGGGGGGag                                                                                                                                                     >  2:1148665/1‑149 (MQ=255)
 caccGGCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGAtg                                                                                                                                                    >  1:831476/4‑150 (MQ=255)
 cAACGGCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGAtg                                                                                                                                                    >  1:945246/1‑150 (MQ=255)
     ggCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTgca                                                                                                                                                <  1:1416558/150‑1 (MQ=255)
     ggCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTgca                                                                                                                                                >  1:7569/1‑150 (MQ=255)
      gCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTgcag                                                                                                                                               >  1:1067120/1‑150 (MQ=255)
          ccccAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAg                                                                                                                                           <  2:1067120/150‑1 (MQ=255)
            ccAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAggg                                                                                                                                         >  2:1136223/1‑150 (MQ=255)
               gCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGCACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTg                                                                                                                                      <  1:1395412/150‑1 (MQ=255)
                 aTCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTgc                                                                                                                                                 <  1:1132342/137‑1 (MQ=255)
                 aTCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTgc                                                                                                                                                 >  2:1132342/1‑137 (MQ=255)
                        aGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTg                                                                                                                             <  1:1065080/150‑1 (MQ=255)
                         gCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTgg                                                                                                                            <  1:151747/150‑1 (MQ=255)
                          cTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGa                                                                                                                           >  1:22801/1‑150 (MQ=255)
                           ttGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGaa                                                                                                                          <  2:7569/150‑1 (MQ=255)
                               tgctgGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCAt                                                                                                                      >  1:195593/1‑150 (MQ=255)
                               tgctgGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGAGCGGGGCTGTGGAGCAAGGGTTGGCATTGCTGGAAGCAt                                                                                                                      >  1:1384399/1‑150 (MQ=255)
                                  tgGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCt                                                                                                                              <  2:903697/139‑1 (MQ=255)
                                  tgGTTTATCGCGATGCCCGGTTGAAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCt                                                                                                                              >  1:903697/1‑139 (MQ=255)
                                   ggTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTcg                                                                                                                  >  1:1080092/1‑150 (MQ=255)
                                    gTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTcgc                                                                                                                 >  1:314703/1‑150 (MQ=255)
                                      ttATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGa                                                                                                               >  1:1256616/1‑150 (MQ=255)
                                         tCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTg                                                                                                                             <  2:613537/133‑1 (MQ=255)
                                         tCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTg                                                                                                                             >  1:613537/1‑133 (MQ=255)
                                         tCGCGATGCCCGGTTGCAGGTGCGCGTTGCCCGGTTGGCTCCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGAGCCTCCGCTGATTGGGCGGGGTTGTGCAGCAAGGGTTGGCATTGCTGCAAGCATTTCGCGAGCa                                                                                                            <  2:410095/150‑1 (MQ=255)
                                         gcgcgATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCa                                                                                                            >  2:979626/2‑150 (MQ=255)
                                           gcgATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAgg                                                                                                          <  2:577919/150‑1 (MQ=255)
                                           gcgATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAgg                                                                                                          <  1:135808/150‑1 (MQ=255)
                                               tGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGCAGCAGGTCGCGAGCAGGgtgt                                                                                                      <  2:1195326/150‑1 (MQ=255)
                                                gCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTc                                                                                                     <  2:1080092/150‑1 (MQ=255)
                                                 cccGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCa                                                                                                    <  2:314703/150‑1 (MQ=255)
                                                 cccGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCa                                                                                                    <  1:998380/150‑1 (MQ=255)
                                                 cccGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCAGTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCa                                                                                                    <  1:1346045/150‑1 (MQ=255)
                                                  ccGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTc                                                                                                     >  2:54561/1‑148 (MQ=255)
                                                  ccGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTc                                                                                                     <  1:54561/148‑1 (MQ=255)
                                                  ccGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCAt                                                                                                   >  2:526623/1‑150 (MQ=255)
                                                       tGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCg                                                                                              <  2:831476/150‑1 (MQ=255)
                                                           ggTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAAc                                                                                          >  2:388523/1‑150 (MQ=255)
                                                                 cTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGTAGGGTGTCATTGTCGGAACAGtgtg                                                                                    >  2:1219368/1‑150 (MQ=255)
                                                                 cTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGtgtg                                                                                    <  1:1136223/150‑1 (MQ=255)
                                                                  tttGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCgggg                                                                                                                                                       >  2:36944/1‑82 (MQ=255)
                                                                  tttGCCCGGTTGGCACCTATGGCGTATCGGTTCCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCgggg                                                                                                                                                       <  1:36944/82‑1 (MQ=255)
                                                                    tGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAg                                                                                 <  1:526623/150‑1 (MQ=255)
                                                                       ccGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCa                                                                              >  1:834852/1‑150 (MQ=255)
                                                                             ggCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTgggg                                                                        <  1:1332274/150‑1 (MQ=255)
                                                                             ggCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTgggg                                                                        >  1:718100/1‑150 (MQ=255)
                                                                               cACCGATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTgggggg                                                                      <  1:1148665/150‑1 (MQ=255)
                                                                                      ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca                                                               <  1:1177954/150‑1 (MQ=255)
                                                                                       gCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTCTCTTTTCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcag                                                              >  2:1183484/1‑150 (MQ=255)
                                                                                             tccgatcTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGTTGCAGGGCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGccc                                                        <  1:36873/144‑1 (MQ=255)
                                                                                               gTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca                                                               >  2:777745/1‑141 (MQ=255)
                                                                                               gTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca                                                               <  1:777745/141‑1 (MQ=255)
                                                                                                    tggtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAgt                                                                                       >  1:923796/1‑112 (MQ=255)
                                                                                                    tggtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAgt                                                                                       <  2:923796/112‑1 (MQ=255)
                                                                                                    tggtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATcc                                                 >  1:1280267/1‑150 (MQ=255)
                                                                                                      gtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGACCTCGATCCTc                                               >  2:812299/1‑150 (MQ=255)
                                                                                                        ggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTgg                                                                          >  2:219806/1‑121 (MQ=255)
                                                                                                        ggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTgg                                                                          <  1:219806/121‑1 (MQ=255)
                                                                                                        ggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCAt                                             <  2:195593/150‑1 (MQ=255)
                                                                                                            cAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGc                                         <  2:72578/150‑1 (MQ=255)
                                                                                                                 gACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGt                                                                                                <  2:22451/90‑1 (MQ=255)
                                                                                                                 gACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGt                                                                                                >  1:22451/1‑90 (MQ=255)
                                                                                                                    cGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGc                                 <  1:979626/150‑1 (MQ=255)
                                                                                                                     gttagagagCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCa                                >  2:733940/4‑150 (MQ=255)
                                                                                                                         gagagCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCt                            >  1:777577/1‑150 (MQ=255)
                                                                                                                             gCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGTAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGc                        <  1:1219368/150‑1 (MQ=255)
                                                                                                                                   gCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGa                  <  2:718100/150‑1 (MQ=255)
                                                                                                                                     aGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATc                >  2:579168/1‑150 (MQ=255)
                                                                                                                                     aGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATc                >  2:958635/1‑150 (MQ=255)
                                                                                                                                       gCATTGGGCGGGAATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa              >  2:639233/1‑150 (MQ=255)
                                                                                                                                       gCATTGGGCGGGAATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa              >  2:639333/1‑150 (MQ=255)
                                                                                                                                         aTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAAAAGTCTGACGGCATCGGGGGGCTGCGCAGCAGCCCCCGATCTTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg            <  2:1230856/150‑1 (MQ=255)
                                                                                                                                              gCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCCGAAGGCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAg       <  1:812299/150‑1 (MQ=255)
                                                                                                                                              gCGGGAATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAg       <  1:639333/150‑1 (MQ=255)
                                                                                                                                              gCGGGAATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAg       <  1:639233/150‑1 (MQ=255)
                                                                                                                                                   gATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcc  >  1:66291/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CCAACGGCTGCCCCAGCATCGCCGAGCTTGCTGCTGGTTTATCGCGATGCCCGGTTGCAGGTGCGCTTTGCCCGGTTGGCACCTATGGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATTGTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCC  >  NC_002947/2744985‑2745281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑