| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 282,327 | G→T | 6.2% | intergenic (+46/‑224) | PP_0228 → / → betT‑II | serine acetyltransferase/choline/carnitine/betaine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 282,327 | 0 | G | T | 6.2% | 301.9 / 6.8 | 98 | intergenic (+46/‑224) | PP_0228/betT‑II | serine acetyltransferase/choline/carnitine/betaine transporter |
| Reads supporting (aligned to +/- strand): ref base G (46/45); new base T (3/3); total (50/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.87e-01 | |||||||||||
GGGTTCGACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAATGAAAAACGCTGGTCC > NC_002947/282179‑282469 | gggTTCGACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGc > 1:474744/1‑150 (MQ=255) ttCGACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGcgaa < 2:1375665/150‑4 (MQ=255) cGACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGcgaaga < 1:638333/150‑6 (MQ=255) gACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTAc > 2:696622/1‑150 (MQ=255) gACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTAc > 1:278403/1‑150 (MQ=255) gACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTAc > 2:424581/1‑150 (MQ=255) ttGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGa < 1:545954/150‑1 (MQ=255) tgtgGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGt > 2:903157/1‑150 (MQ=255) tgGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAg > 1:1091166/1‑150 (MQ=255) tgGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAg > 1:1415368/1‑150 (MQ=255) gCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAggg < 2:474744/150‑1 (MQ=255) gCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCCGGCCTTTTCGCGGGTTAGCCCTCCCCTACAttggtatgttctttgtagga > 2:563179‑M1/1‑130 (MQ=255) aCTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCCGGCCTTTTCGCGGGTTAGCCCTCCCCTACAttggtatgttctttgtaggagcgg < 1:563179‑M1/150‑25 (MQ=255) tCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACaaa > 2:189030/1‑126 (MQ=255) tCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACaaa < 1:189030/126‑1 (MQ=255) tCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGc > 1:1166047/1‑150 (MQ=255) gCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTa > 2:54217/1‑150 (MQ=255) gCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAACTCCCGGCTACAAAGAACATAACAATGTAGGGGAGGGATa > 1:74524/1‑150 (MQ=255) tgCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCCCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCcgc > 1:1345572/1‑150 (MQ=255) ccGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGa > 1:92493/1‑150 (MQ=255) cGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGaa > 1:1069581/1‑150 (MQ=255) ggCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAggg < 1:228292/137‑1 (MQ=255) ggCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAggg > 2:228292/1‑137 (MQ=255) tGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAgg > 1:792158/1‑150 (MQ=255) aaGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg < 1:424581/150‑1 (MQ=255) aaGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg < 2:861374/150‑1 (MQ=255) aGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCgg > 1:356945/1‑150 (MQ=255) aGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg > 2:1039437/1‑149 (MQ=255) aGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg < 1:1039437/149‑1 (MQ=255) gCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCAGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCggc > 1:1115095/1‑149 (MQ=255) tCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGTTAGCCCTCCCCTACAttggtatgttctttgtaggagcgggcttgcccgcgaagaggccagcacag < 1:433417‑M1/144‑51 (MQ=255) tCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGTTAGCCCTCCCCTACAttggtatgttctttgtaggagcgggcttgcccgcgaagaggccagcacag > 2:433417‑M1/1‑94 (MQ=255) tCAGGCCAACCTGCAGCTGGACTGAAAGGACAAAAACTGATTCCGCAGTGCAATTGCGTGTGCCGACCTGTTCTCTGGCAAGACCGTTGCTACAAAGAACATACAAATGTAGAGGAGTGCTAACCCGCGAAAAGGCCGGAGCAGgacgac < 2:1115095/150‑1 (MQ=255) aGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg > 2:542583/1‑136 (MQ=255) aGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg < 1:542583/136‑1 (MQ=255) aGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGgacgac < 2:1102849/148‑1 (MQ=255) aGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGgacgac > 1:1102849/1‑148 (MQ=255) aGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGacac > 1:234322/1‑150 (MQ=255) aGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGacac < 1:54217/150‑1 (MQ=255) gCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAAc < 2:737843/120‑1 (MQ=255) gCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAAc > 1:737843/1‑120 (MQ=255) cAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTc < 1:558773/83‑1 (MQ=255) cAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTc > 2:558773/1‑83 (MQ=255) cAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAAt > 1:717022/1‑150 (MQ=255) aaCCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAAGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATc > 2:1295579/1‑150 (MQ=255) tGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGCTCCGGCCTTTTCGCGGGTTAGCCCTCCCCTACAttggtatgttctttgtaggagcgggcttgcccgcgaagaggccagcaca > 2:1395859‑M1/1‑83 (MQ=255) tGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGCTCCGGCCTTTTCGCGGGTTAGCCCTCCCCTACAttggtatgttctttgtaggagcgggcttgcccgcgaagaggccagcaca < 1:1395859‑M1/132‑50 (MQ=255) gCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGcgaa < 2:51639/75‑4 (MQ=25) gCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCTTGCCCGcgaa > 1:51639/1‑72 (MQ=25) aCTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTc < 1:533923/150‑1 (MQ=255) cTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGc < 1:1074854/115‑1 (MQ=255) cTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGc > 2:1074854/1‑115 (MQ=255) gCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCa < 2:1166047/150‑1 (MQ=255) ccAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCAt > 1:687493/1‑150 (MQ=255) ccAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCAt > 2:412549/1‑150 (MQ=255) ccAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCAt < 2:356945/150‑1 (MQ=255) cAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTa > 2:1202386/1‑86 (MQ=255) cAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTa < 1:1202386/86‑1 (MQ=255) cAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTCGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCAtt < 1:903157/150‑1 (MQ=255) aGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGccc < 1:1266840/138‑1 (MQ=255) aGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGccc > 2:1266840/1‑138 (MQ=255) ggACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGa < 2:1069581/150‑1 (MQ=255) aCAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGaaa > 1:63750/1‑150 (MQ=255) aCAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGaaa < 2:1339188/150‑1 (MQ=255) cAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAAt > 1:1350671/1‑150 (MQ=255) aaGAACTGCCCCCGCTGTGCAATTGCCTTTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATc < 2:792158/150‑1 (MQ=255) aaGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATc > 1:424448/1‑150 (MQ=255) gAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCg > 2:22852/1‑150 (MQ=255) gAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTAAAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCg > 1:174536/1‑150 (MQ=255) gAACTGATCCCGCAGTGCAATTGACTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCg > 2:728668/1‑150 (MQ=255) aaCTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTTCAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGa < 1:728668/150‑1 (MQ=255) aCTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg > 1:1249684/1‑103 (MQ=255) aCTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCg < 2:1249684/103‑1 (MQ=255) gATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCa < 1:22852/150‑1 (MQ=255) gATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCa > 1:425843/1‑150 (MQ=255) ccGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGgac < 1:1124094/105‑1 (MQ=255) ccGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGgac > 2:1124094/1‑105 (MQ=255) cAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGc > 1:1036946/1‑91 (MQ=255) cAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGc < 2:1036946/91‑1 (MQ=255) tGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGgac > 1:1153719/1‑99 (MQ=255) tGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGgac < 2:1153719/99‑1 (MQ=255) tGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTACCtt < 2:1091166/150‑1 (MQ=255) aaTTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGaa < 1:1172132/150‑1 (MQ=255) aaTTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGaa < 2:1415368/150‑1 (MQ=255) tgtgCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGt > 1:332694/1‑150 (MQ=255) gtgCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGtt < 2:228163/150‑1 (MQ=255) cTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCaa < 2:332694/150‑1 (MQ=255) cTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCaa < 2:1350671/150‑1 (MQ=255) gggCCGCGTCGCGGGCAAGCCCGCTCCTACAAAGAACATCCCAATGTAGTGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAAt < 2:234322/149‑1 (MQ=255) gCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAATGa > 1:862632/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAAt < 2:1044503/145‑1 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAAt > 1:1044503/1‑145 (MQ=255) gggCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAATGAAAAACGCTgg < 2:278403/150‑1 (MQ=255) ggCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAATGAAAAACGCTGGt < 1:412549/150‑1 (MQ=255) gCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAATGAAAAACGCTGGTc < 2:433918/150‑1 (MQ=255) cAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAATGAAAAACGCTGGTcc < 2:425843/150‑1 (MQ=255) aaGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAAt < 2:189969/134‑1 (MQ=255) aaGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAAt > 1:189969/1‑134 (MQ=255) | GGGTTCGACCATTGGCGGTAATGTGTGGCTGACTCGCAGTGTGCCGGCTGAAAGCAACATTACTCAGGCCAACCTGCAGCTGGACTGCCAGGACAAGAACTGATCCCGCAGTGCAATTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGAACATACCAATGTAGGGGAGGGCTAACCCGCGAAAAGGCCGGAGCAGGACGACACCAATCAGCGCCCCAATTCGCATTGAAATCCGATCCATGTTTAACTTGAACGCTTGTTCAATGAAAAACGCTGGTCC > NC_002947/282179‑282469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |