Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,989,261 | A→C | 6.9% | Y42D (TAT→GAT) | PP_2613 ← | hypothetical protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,989,261 | 0 | A | C | 6.9% | 207.3 / 6.4 | 73 | Y42D (TAT→GAT) | PP_2613 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base A (32/36); new base C (3/2); total (35/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01 |
CAGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGACAGGAGCCATC > NC_002947/2989112‑2989407 | caGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑a > 2:958699/1‑150 (MQ=255) cAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGc < 1:55301/150‑1 (MQ=255) aaaGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGcc < 2:258618/150‑1 (MQ=255) cccAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCTAT‑CGGCCCatcc < 1:1330765/150‑4 (MQ=255) ccAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTtc > 1:978911/1‑150 (MQ=255) cAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTtct > 1:93280/1‑150 (MQ=255) aaaCTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTtct‑c < 1:109133/150‑1 (MQ=255) tGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATTAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCa < 1:25365/150‑1 (MQ=255) tGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCa > 1:933043/1‑150 (MQ=255) aTCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTAGAGTTTAGTTGTTACATAAGCAGGAACCAGTTCACCTTCCTGCGGGATAGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGtaaa > 2:760296/1‑147 (MQ=255) ttcCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCgg > 2:771487/1‑150 (MQ=255) ttcCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCgg > 2:533672/1‑150 (MQ=255) tcCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGc > 2:487244/1‑150 (MQ=255) ccATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCa > 1:1306740/1‑150 (MQ=255) cATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAg > 1:764351/1‑150 (MQ=255) aTAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGt > 1:1081215/1‑150 (MQ=255) tGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGc > 1:400630/1‑150 (MQ=255) ccTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGa < 1:47920/150‑1 (MQ=255) cTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGat < 2:978911/150‑2 (MQ=255) cTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGaa < 2:1081215/150‑1 (MQ=255) cTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTATGCAATTG‑ACTTTTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGaa < 1:958699/150‑1 (MQ=255) gAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCtt < 1:533672/150‑1 (MQ=255) aGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTc > 2:1291355/1‑150 (MQ=255) cGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTgcgc < 2:410506/150‑1 (MQ=255) tGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCggag > 1:1015563/1‑150 (MQ=255) gACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGa > 1:364275/1‑89 (MQ=255) gACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGa < 2:364275/89‑1 (MQ=255) aGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAg > 1:1066012/1‑79 (MQ=255) aGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAg < 2:1066012/79‑1 (MQ=255) tttATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGa < 1:435619/97‑1 (MQ=255) tttATAAGGTCGAGTACCGAGGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGa > 2:435619/1‑97 (MQ=255) ataAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGAc > 2:955751/1‑150 (MQ=255) aaGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGATTTGATTACaa < 2:764351/150‑1 (MQ=255) gTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTgcgc > 2:229982/1‑130 (MQ=255) gTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTgcgc < 1:229982/130‑1 (MQ=255) cGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAggtgg < 2:933043/150‑1 (MQ=255) tACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGGTGGGCCGAT‑AGGCCCAGTTCT‑CGa > 2:1034310/1‑68 (MQ=255) tACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGa < 1:1034310/68‑1 (MQ=255) tACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCAt > 2:237409/1‑150 (MQ=255) aCCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGCCTACAAGGTGGTCAtt < 1:760296/150‑1 (MQ=255) ccGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTg < 2:93280/150‑1 (MQ=255) gATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGa > 2:923736/1‑150 (MQ=255) aTGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGAc < 2:400630/150‑1 (MQ=255) aTGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGAc > 1:1362950/1‑150 (MQ=255) ggCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGc < 1:1291355/150‑1 (MQ=255) gCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGAGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGcc > 2:948315/1‑150 (MQ=255) cATAAGCAGTAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGGGGTGATGACAAGGTGGTCATTGGACTTGccc < 1:771487/150‑1 (MQ=255) cATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGccc < 1:1061123/150‑1 (MQ=255) gCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAggtggt < 2:902412/131‑1 (MQ=255) gCAAGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAggtggt > 1:902412/1‑131 (MQ=255) cAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGcgcg < 2:576845/108‑1 (MQ=255) cAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGcgcg > 1:576845/1‑108 (MQ=255) cAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGAt < 2:1306740/150‑1 (MQ=255) gAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGa < 1:894885/146‑1 (MQ=255) gAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGa > 2:894885/1‑146 (MQ=255) aCCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGc > 2:303948/1‑150 (MQ=255) aCCAGTTCACCTTCCTGCGGGATGGGCACATAAGACCGACTTCG‑GGGATTTGCT‑GTCGTGATGAGCAGAAAGGAGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGc < 1:1385923/150‑1 (MQ=255) ccAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCg < 2:1207622/150‑1 (MQ=255) gTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCa > 1:1191538/1‑150 (MQ=255) ctgccTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCggg > 1:1420929/4‑150 (MQ=255) cTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGAGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCggg < 1:948315/150‑1 (MQ=255) ttCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGt < 2:814141/150‑1 (MQ=255) cTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAgg < 1:237409/150‑1 (MQ=255) tGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAggg < 1:487244/150‑1 (MQ=255) tGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAggg > 2:120406/1‑150 (MQ=255) gaactGGGCCTAT‑CGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGAc > 2:371376/5‑150 (MQ=255) aactGGGCCTAT‑CGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGAc < 1:1375437/146‑1 (MQ=255) aactGGGCCTAT‑CGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGAc > 2:1375437/4‑149 (MQ=255) tGGGCCTAT‑CGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGCGGTGATGACAAGGTGGTCATTGGACTTGCGCTCGGATACAGCGGCAATCGGCTAGGGCAccgca > 1:733551/1‑146 (MQ=255) tGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGACAGGa < 2:1420929/150‑1 (MQ=255) ggCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGACAGGAGc < 1:923736/150‑1 (MQ=255) gCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAggt > 2:1173469/1‑97 (MQ=255) gCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAggt < 1:1173469/97‑1 (MQ=255) gAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGACAGGAGCCATc > 2:799316/1‑150 (MQ=255) | CAGCAAAGGCCCAAACTCATGACGGTCATCCAGGGCGCTGTTCTTCCATAACCATGCCTTTTGAGTATTTCGGCTGACAGCGTTTATAAGGTCGAGTACCGATGGGGCATAAGCAGGAACCAGTTCACCTTCCTGCGGGATGGGCCGAT‑AGGCCCAGTTCT‑CGATTGCACTGGTCATGAGCAGCAGAAAGCGGCAGTTGTGAGCGAAGTCTTCGCTGCGCGGAGGAGGTGATGACAAGGTGGTCATTGGACTTGCCCTCGGATACAGCGGCAATCGGGTAGGGGACAGGAGCCATC > NC_002947/2989112‑2989407 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |