| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 27,581 | C→T | 10.0% | intergenic (‑428/+18) | PP_0022 ← / ← PP_0023 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 27,581 | 0 | C | T | 10.0% | 184.5 / 9.0 | 72 | intergenic (‑428/+18) | PP_0022/PP_0023 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (34/29); new base T (4/3); total (40/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
CAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATGCA > NC_002947/27435‑27730 | cAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCga < 1:40869/150‑1 (MQ=255) tctcGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGagag > 1:789269/1‑150 (MQ=255) tcgtcgTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAgct > 2:771781/1‑150 (MQ=255) tcgtcgTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACAAAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAgct > 2:500810/1‑150 (MQ=255) tcgtcgTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACACAAACCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAACGCAGCTC‑CCGAGAgcg > 1:449755/1‑149 (MQ=255) tcgtcCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAgctgct < 2:789269/150‑1 (MQ=255) cTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGATACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTa < 1:524859/150‑1 (MQ=255) gggATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCCCAAAGCAACACCCAAAAGGCGGCTG‑GGTGGAGATGGTTTTTTCTTACTccc > 1:672202/1‑150 (MQ=255) ggATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTcccc > 2:470300/1‑150 (MQ=255) cGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTtg > 1:136719/1‑150 (MQ=255) gATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTtgt > 2:432226/1‑150 (MQ=255) ggAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTtg > 2:1165323/1‑150 (MQ=255) ttCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTc > 1:643095/1‑150 (MQ=255) ttCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCATTTTTGAACTTGGGGGGTTTc > 2:8530/1‑150 (MQ=255) ttCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAACCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTc > 2:619326/1‑150 (MQ=255) tCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCa > 2:664604/1‑150 (MQ=255) cAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAg < 1:470300/150‑1 (MQ=255) cAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAG‑AGATCAAATATATCGGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAg > 2:1106799/1‑150 (MQ=255) aaGAATCCATAAAGGCAAGCGGAAGAATCAGGACGCGGTCCGATTGATCAGCGAGACGGGGGTGAGGGTTTGCACACAGCAACAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAg < 2:547968/149‑1 (MQ=255) aGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAgg > 1:1208632/1‑150 (MQ=255) aaTCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTTTGCTTGTGGGGTTTCAGGTc > 2:1398134/1‑150 (MQ=255) gccaagcGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTcc < 2:643095/150‑1 (MQ=255) caagcGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCtt > 1:938958/1‑150 (MQ=255) gAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCttttt > 2:69118/1‑111 (MQ=255) gAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCttttt < 1:69118/111‑1 (MQ=255) aGACTCACGACGCGGTCCGATTGATCAGCGAGCCGGCCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGCGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCtttt < 1:8530/150‑1 (MQ=255) cTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAg < 1:771781/150‑1 (MQ=255) cTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAg < 1:432226/150‑1 (MQ=255) tCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACAAAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAgg < 1:500810/150‑1 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCtt > 2:1119951/1‑109 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCtt < 1:1119951/109‑1 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTtgt > 2:219000/1‑111 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTtgt < 1:219000/111‑1 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGt > 2:56374/1‑116 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGt < 1:56374/116‑1 (MQ=255) cgcgGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGAc < 1:710299/150‑1 (MQ=255) gcgGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACt > 1:109334/1‑150 (MQ=255) aCGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTg < 2:786547/150‑1 (MQ=255) ggTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGcc < 2:1208632/150‑1 (MQ=255) ggTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGcc > 1:940504/1‑150 (MQ=255) tCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTc < 1:1339236/103‑1 (MQ=255) tCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTc > 2:1339236/1‑103 (MQ=255) gTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCt > 1:490720/1‑150 (MQ=255) tGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCtt > 2:1320669/1‑150 (MQ=255) tGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGCCCGGATGGTCCTTCTGCTTTTCAggg > 2:950902/1‑116 (MQ=255) tGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGCCCGGATGGTCCTTCTGCTTTTCAggg < 1:950902/116‑1 (MQ=255) gggTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCa > 2:632406/1‑84 (MQ=255) gggTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCa < 1:632406/84‑1 (MQ=255) ttGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGt < 2:136719/150‑1 (MQ=255) cacacaGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTgcg > 2:949278/1‑150 (MQ=255) acaGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTggg < 1:343746/68‑1 (MQ=255) acaGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTggg > 2:343746/1‑68 (MQ=255) acaGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGa > 2:227899/1‑107 (MQ=255) acaGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGa < 1:227899/107‑1 (MQ=255) cccAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGc > 1:268281/1‑150 (MQ=255) ccAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGcc > 1:537945/1‑150 (MQ=255) ccAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTGTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTATGCTTTTCAGGGGTAACTCGCTGCCTTTCGTCCGGAGTGCCATCTTCATTGGTGCGCATTgggtc > 2:423114/1‑148 (MQ=255) cAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGCTTCCCATCTTCATTGGTGCGCTTTGGGCCt < 1:1106799/150‑1 (MQ=255) aaaaGCAGCTC‑TCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGt < 2:1188055/109‑1 (MQ=255) aaaaGCAGCTC‑TCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGt > 1:1188055/1‑109 (MQ=255) aaaGCAGCTC‑TCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAg < 2:1285203/87‑1 (MQ=255) aaaGCAGCTC‑TCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAg > 1:1285203/1‑87 (MQ=255) aaaGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGa < 2:537945/150‑1 (MQ=255) aaGCAGCTC‑TCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCGTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGAt > 1:768807/1‑150 (MQ=255) aaGCAGCTC‑CCGAGAGCTGCTTTTTTTTTACTTCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGAt > 2:1217769/1‑150 (MQ=255) aaGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGAt < 2:490720/150‑1 (MQ=255) aaGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGAt < 1:664604/150‑1 (MQ=255) agcagcTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATg < 1:1398134/150‑1 (MQ=255) cagcTC‑TCGGGAGCTGCTTTTTTTTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCt > 1:1192598/1‑150 (MQ=255) gcTC‑TCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGa < 1:1097927/107‑1 (MQ=255) tC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGa < 2:1000531/105‑1 (MQ=255) tC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGa > 1:1000531/1‑105 (MQ=255) ccGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATGCa > 1:407055/1‑150 (MQ=255) ccGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATGCa > 2:1321439/1‑150 (MQ=255) | CAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAGCAGCTC‑CCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATGCA > NC_002947/27435‑27730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |