| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,031,138 | C→G | 11.6% | I134M (ATC→ATG) | mgtA → | ATP‑dependent magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,031,138 | 0 | C | G | 11.6% | 231.0 / 17.5 | 76 | I134M (ATC→ATG) | mgtA | ATP‑dependent magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base C (42/25); new base G (4/5); total (46/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
CCTGGTGCAACTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCCGCGCCTGCGCGAAG > NC_002947/3030994‑3031286 | ccTGGTGCAACTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGAc < 2:325488/150‑1 (MQ=255) gTGCAACTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATg < 2:785600/150‑1 (MQ=255) gTGCAACTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATg < 2:644565/150‑1 (MQ=255) tGCAACTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCATGGTCATGATGATGATGACCTTgg < 1:347771/150‑1 (MQ=255) aaCTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCATGGTCATGATGATGATGACCTTGGTCa > 1:905112/1‑150 (MQ=255) cTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGc > 1:418824/1‑150 (MQ=255) tCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCATGGTCATGATGATGATGAccttg > 1:743134/1‑137 (MQ=255) tCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCATGGTCATGATGATGATGACCTTg < 2:743134/140‑1 (MQ=255) tCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTca > 1:414681/1‑150 (MQ=255) tCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTca > 2:786799/1‑150 (MQ=255) tCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTca > 2:121648/1‑150 (MQ=255) cAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCATGGTCATGATGATGATGACCTTGGTCAggtcggc < 2:905112/150‑7 (MQ=38) aaGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTcagc < 2:905251/150‑1 (MQ=255) aaGGCCCTGAACAACCCATTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTcagc > 1:510397/1‑150 (MQ=255) aGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCTAGCTGGCCAAAGTCATCAGCATGATGACCATGGTCAGCCTcagca < 1:1247688/150‑1 (MQ=255) gCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCagcagc < 1:759085/150‑1 (MQ=255) caacCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCg < 2:414681/150‑1 (MQ=255) aacCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGa > 2:1305277/1‑150 (MQ=255) acCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGAt < 1:1305277/150‑1 (MQ=255) cccGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGAtt > 1:1137418/1‑150 (MQ=255) ccGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATTGTCGGCCTCAGCAGCCTCCTGCGATTc > 2:233423/1‑150 (MQ=255) ccGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTc > 1:863006/1‑150 (MQ=255) ccGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTc > 1:1122274/1‑150 (MQ=255) cGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCt > 1:898773/1‑150 (MQ=255) gTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATg < 1:309466/121‑1 (MQ=255) gTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATg > 2:309466/1‑121 (MQ=255) gTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTg > 1:626284/1‑150 (MQ=255) aTCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAg > 2:1127281/1‑150 (MQ=255) aTCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAg < 1:1226348/150‑1 (MQ=255) aTCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAg > 1:1406958/1‑150 (MQ=255) cTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGa > 2:1256567/1‑150 (MQ=255) gaagctgATCCCGGCCAGGGTCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCg > 2:804251/4‑150 (MQ=255) ctgACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGtcatcatcatca > 1:349997/1‑97 (MQ=255) ctgACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGgcatcatcatca < 2:349997/97‑1 (MQ=255) aCCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAAc > 2:517050/1‑150 (MQ=255) ccTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACaa > 1:1188148/1‑150 (MQ=255) ccTGGCCGGGATCAGCTTCGTCACCGACTACGGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACaa > 1:1102013/1‑150 (MQ=255) cTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAg < 1:1256567/150‑1 (MQ=255) cTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAg < 2:1137418/150‑1 (MQ=255) gCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCt < 2:418824/150‑1 (MQ=255) ggATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCg > 2:1377440/1‑150 (MQ=255) gATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGa > 1:849794/1‑150 (MQ=255) cTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCt > 2:389425/1‑150 (MQ=255) ttCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCa < 1:237730/116‑1 (MQ=255) ttCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCa > 2:237730/1‑116 (MQ=255) ttCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTc > 2:1158851/1‑150 (MQ=255) tCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAATCAGACGACGCCGACCTGACCAAGGGCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGATCAAAg > 1:390045/1‑150 (MQ=255) ccGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGc > 1:197747/1‑133 (MQ=255) ccGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGc < 2:197747/133‑1 (MQ=255) ccGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATAACCGTTGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCaa < 1:804251/150‑1 (MQ=255) cGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAAt > 1:1303880/1‑150 (MQ=255) gACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATg < 2:510397/150‑1 (MQ=255) ctGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTgcg > 1:199576/1‑150 (MQ=255) tGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTgcgc > 2:465301/1‑150 (MQ=255) gCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAGGCCCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGAc < 1:449042/127‑1 (MQ=255) gCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGAc > 2:449042/1‑127 (MQ=255) gCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCAc > 2:1042652/1‑150 (MQ=255) gCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCAc > 1:92019/1‑150 (MQ=255) tGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTa > 1:698445/1‑150 (MQ=255) cAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGgtgt < 1:389425/150‑1 (MQ=255) gacgacGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAg > 2:684924/1‑150 (MQ=255) gCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAg < 2:307219/69‑1 (MQ=255) gCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAg > 1:307219/1‑69 (MQ=255) gCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATc > 2:812314/1‑150 (MQ=255) cGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCgg < 1:517050/150‑1 (MQ=255) cGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCgg < 2:897567/150‑1 (MQ=255) gcTGACCATGGTCATGATGATGATGACCTTGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCggg < 2:1243760/147‑1 (MQ=39) gcTGACCATGGTCATGATGATGATGACCTTGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCggg > 1:1243760/2‑148 (MQ=39) cTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGAc < 2:404054/90‑1 (MQ=255) cTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGAc > 1:404054/1‑90 (MQ=255) tGACCATGGTCATGATGATGATGACCTTGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAg > 2:1070906/1‑150 (MQ=255) cAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTa > 1:1188844/1‑110 (MQ=255) cAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTa < 2:1188844/110‑1 (MQ=255) cAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCaa < 1:1222722/145‑1 (MQ=255) cAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCaa > 2:1222722/1‑145 (MQ=255) cAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGcccc > 1:786489/1‑150 (MQ=255) cAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGcccc > 1:840588/1‑150 (MQ=255) aGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCcgc < 2:849794/150‑1 (MQ=255) tcatcatcatcaTGAACATCGTTAGTGTCACCAGCCTTCTGCGCTTCGATCAGGAGGACCGCGCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCCGCGcc > 2:15324/1‑150 (MQ=255) tcatcatcatGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCCGCGCCTgc < 2:863006/150‑1 (MQ=255) atcatcatGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGTCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCCGCGCCTgcgc > 1:178580/1‑150 (MQ=255) atcatGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCACGCCCCGCGCCTGCGCGaa < 2:1128665/150‑1 (MQ=255) atcatGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCCGCGCCTGCGCGaa < 2:840588/150‑1 (MQ=255) tcatGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCCGCGCCTGCGCGAAg < 2:1122274/150‑1 (MQ=255) | CCTGGTGCAACTGCTCAAGGCCCTGAACAACCCGTTCATCTATGTACTGCTGACCCTGGCCGGGATCAGCTTCGTCACCGACTACTGGCTGCCGGTCAGCGCAGGCGAAGCAGACGACGCCGACCTGACCAAGGTCATCATCATCATGACCATGGTCAGCCTCAGCAGCCTGCTGCGATTCTGGCAGGAGTACCGCTCGAACAAGGCTGCCGACGCGCTCAAAGCAATGGTGCGCACTACGGCCACGGTGTTGCGCCGCGAGCAGATCGGGCAAGCCCCGCGCCTGCGCGAAG > NC_002947/3030994‑3031286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |