Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,286,493 T→G 13.2% N154K (AAT→AAG PP_2888 → ECF family RNA polymerase sigma factor PrtI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,286,4930TG13.2% 140.3 / 13.8 62N154K (AAT→AAGPP_2888ECF family RNA polymerase sigma factor PrtI
Reads supporting (aligned to +/- strand):  ref base T (26/27);  new base G (4/4);  total (30/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01

ACCTGCAGGCCTTTGCCCGGCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGCCGAGGTGCAGGCCTGGCTG  >  NC_002947/3286348‑3286642
                                                                                                                                                 |                                                                                                                                                     
aCCTGCAGGCCTTTGCCCGGCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCt                                                                                                                                                   >  1:1081520/1‑150 (MQ=255)
   tGCAGGCCTTTGCCCGGCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATg                                                                                                                                                      <  2:499172/144‑1 (MQ=255)
   tGCAGGCCTTTGCCCGGCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATg                                                                                                                                                      >  1:499172/1‑144 (MQ=255)
     cAGGCCTTTGCCCGGCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGGTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAAGGCATTgcgc                                                                                                                                              <  1:677430/150‑1 (MQ=255)
         ccTTTGCCCGGCTGACGGCGGAGCAGTGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGATTTACAAGGAGGCCGCCCACCCCTCGGGCAACGCCATCGGCCCTGTGTTGCCGCGCCTATCGCCCTCGCGCAAGGCATTGtgcgcgc                                                                                                                                          <  2:410540/150‑4 (MQ=255)
           tttGCCCGGCTGACGGCGGAGCAGCGTGCCTTGTTGGTGCTTGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTg                                                                                                                                        >  1:274621/1‑150 (MQ=255)
                ccGGCTGACGGCGGAGCGGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGa                                                                                                                                   >  1:1256288/1‑150 (MQ=255)
                 cGGCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAg                                                                                                                                  <  2:1031863/150‑1 (MQ=255)
                  ggCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGGGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGAcc                                                                                                                                     <  1:1300502/146‑1 (MQ=255)
                  ggCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGGGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGAcc                                                                                                                                     >  2:1300502/1‑146 (MQ=255)
                  gacTGACGGCCGAGCAGCGGTCCTTGTTGTTTATGGTGAGGATCGAAGGCTTGAGTGAGAAGGTGGCCGCCCAGCCCCTGGGGATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAgg                                                                                                                                 <  2:593201/148‑1 (MQ=255)
                   gCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAggg                                                                                                                                <  1:466803/150‑1 (MQ=255)
                   gCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAggg                                                                                                                                <  1:331983/150‑1 (MQ=255)
                          gcggAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGcaacccc                                                                                                                         <  2:948699/150‑1 (MQ=255)
                             gAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGa                                                                                                                                   <  2:672170/137‑1 (MQ=255)
                             gAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGAGCGCAATGCCTTGCGCGAACTGACCGa                                                                                                                                   >  1:672170/1‑137 (MQ=255)
                                   cGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCg                                                                                                                <  1:1209532/150‑1 (MQ=255)
                                      gCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGcaacccccaa                                                                                                                      >  1:1309987/1‑141 (MQ=255)
                                      gCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGcaacccccaa                                                                                                                      <  2:1309987/141‑1 (MQ=255)
                                            ttgttgCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCgg                                                                                                       >  2:1310965/1‑150 (MQ=255)
                                             tgttgCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGga                                                                                                      <  1:488358/150‑1 (MQ=255)
                                               ttgCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCACCCTCCGGTGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGgaga                                                                                                    <  2:556864/150‑1 (MQ=255)
                                               ttgCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGgaga                                                                                                    <  1:1310965/150‑1 (MQ=255)
                                                       cAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATg                                                                                            >  2:564487/1‑150 (MQ=255)
                                                        aGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGa                                                                                           >  1:487729/1‑150 (MQ=255)
                                                           aTCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGcaacccc                                                                                                                         >  2:822046/1‑117 (MQ=255)
                                                           aTCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGcaacccc                                                                                                                         <  1:1187187/117‑1 (MQ=255)
                                                           aTCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGcaacccc                                                                                                                         <  1:822046/117‑1 (MQ=255)
                                                           aTCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGcaacccc                                                                                                                         >  2:1187187/1‑117 (MQ=255)
                                                           aTCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCACAACCCCCGGCCTTGCGCCGACGGAAAttaggc                                                                                        >  2:307496/1‑145 (MQ=255)
                                                             cGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCTATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCTTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCgg                                                                                      <  2:626688/150‑1 (MQ=255)
                                                               aaGGCTTGGGTTACAAGGAGGCCGCCCAGTCGTTGGGCATCCCCATCGCCACTGTGATGTCGCGCCTGTCGAGAGCGCGCAATTCCTTGCGACAGCTGAGCGCGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAGTGACGCGCCt                                                                                    >  2:692130/1‑150 (MQ=255)
                                                               aaGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAg                                                                                                                                  >  2:1099451/1‑104 (MQ=255)
                                                               aaGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAg                                                                                                                                  <  1:1099451/104‑1 (MQ=255)
                                                                  gCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGAt                                                                                 >  2:275765/1‑150 (MQ=255)
                                                                   cTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCCCTGCCTGGCTAGCACTGACCGAGGGCAACCCCCAACCCCCGGACTTGCGGAGACTGAAATGACGCGGCTGATc                                                                                >  1:386074/1‑150 (MQ=255)
                                                                         ttACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAAGGCATTGcgcgc                                                                                                                                            <  1:77636/84‑2 (MQ=255)
                                                                         ttACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAAGGCATTGcgcgc                                                                                                                                            >  2:77636/1‑83 (MQ=255)
                                                                                     cgccCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGaaa                                                                                              >  1:403456/1‑118 (MQ=255)
                                                                                     cgccCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGaaa                                                                                              <  2:403456/118‑1 (MQ=255)
                                                                                      gccCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGc                                                             >  1:154348/1‑150 (MQ=255)
                                                                                        ccAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCAc                                                           <  2:154348/150‑1 (MQ=255)
                                                                                        ccAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCAc                                                           <  1:185156/150‑1 (MQ=255)
                                                                                         cAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACg                                                          >  1:1318615/1‑150 (MQ=255)
                                                                                          aGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGc                                                         <  2:1256288/150‑1 (MQ=255)
                                                                                             ccTAGGGCAGCCCCATCGGCACTGTGATGTAGCGCCTGTCGCGCGCGCGCAGTGCCTTGCGCGAACTGTCCGAGGGCAACCCCCAACCCCCGGCCTTTCGGAGACTGAAATGACGCCGCTGATCCCCACCGATGATCAATTGCACGCttt                                                      >  2:164328/1‑150 (MQ=255)
                                                                                               ttGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTtcg                                                    >  1:5732/1‑150 (MQ=255)
                                                                                                   gCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGa                                                <  1:690386/150‑1 (MQ=255)
                                                                                                     aTCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATg                                              >  1:841555/1‑150 (MQ=255)
                                                                                                         ccATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGTGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGCTGAACg                                          >  2:175861/1‑150 (MQ=255)
                                                                                                            tCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCt                                       <  1:510688/150‑1 (MQ=255)
                                                                                                                 aCTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAAc                                  <  2:5732/150‑1 (MQ=255)
                                                                                                                           cgcgCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCg                        <  2:841555/150‑1 (MQ=255)
                                                                                                                            gcgcCTGTCGCGCGCGCGCAATACCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAAtt                                                               <  1:173583/110‑1 (MQ=255)
                                                                                                                            gcgcCTGTCGCGCGCGCGCAATACCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAAtt                                                               >  2:173583/1‑110 (MQ=255)
                                                                                                                              gcCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGc                     >  1:873422/1‑150 (MQ=255)
                                                                                                                                 tGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGCCGa                  <  2:530707/150‑1 (MQ=255)
                                                                                                                                        ttcgcgcAAGGCATTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGCCGAGGTGCAg           >  1:17986/3‑150 (MQ=255)
                                                                                                                                          cgcgcAAGGCATTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGcc                    <  1:1416532/139‑1 (MQ=255)
                                                                                                                                          cgcgcAAGGCATTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGCCGAGGTGCAGGc         >  1:1068559/1‑150 (MQ=255)
                                                                                                                                          cgcgcAAGGCATTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCATTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGcc                    >  2:1416532/1‑139 (MQ=255)
                                                                                                                                             gcAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGCCGAGGTGCAGGCctg      <  2:873422/150‑1 (MQ=255)
                                                                                                                                                 tGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGCCGAGGTGCAGGCctggctg  <  2:386074/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
ACCTGCAGGCCTTTGCCCGGCTGACGGCGGAGCAGCGTGCCTTGTTGTTGCTGGTCAGCATCGAAGGCTTGAGTTACAAGGAGGCCGCCCAGGCCTTGGGCATCCCCATCGGCACTGTGATGTCGCGCCTGTCGCGCGCGCGCAATGCCTTGCGCGAACTGACCGAGGGCAACCCCCAACCCCCGGCCTTGCGGAGACTGAAATGACGCGGCTGATCCCCAGCGATGATGAATTGCACGCTTTCGTCGATGAACGCCTGGAACCTGTGCGCCGGGCCGAGGTGCAGGCCTGGCTG  >  NC_002947/3286348‑3286642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: