BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,340,125	0	A	G	36.3%	171.8 / 144.5	147	intergenic (+66/‑265)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand): ref base A (46/47); new base G (30/23); total (77/70)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 152 total aligned reads displayed.

CCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCA  >  NC_002947/4339979‑4340269

ccgcTTAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATTGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGacac                                                                                                                                                <  1:6232848/150‑1 (MQ=255)

ccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGacac                                                                                                                                                <  1:93756/150‑1 (MQ=255)

ccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGacac                                                                                                                                                <  1:93814/150‑1 (MQ=255)

ccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGTTTACCGCGAATGCGAGGGTGtcac                                                                                                                                                >  1:5904686/1‑150 (MQ=255)

    tGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACaccacc                                                                                                                                            <  2:7210603/150‑1 (MQ=255)

      aaaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAAACCACCGa                                                                                                                                          >  2:7072739/1‑150 (MQ=255)

       aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                         <  2:3054819/150‑1 (MQ=255)

            gcgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt                                                                                                                                    <  1:3859250/150‑1 (MQ=255)

             cgGGGCTGGCGGGCTATGTGCTGGAGGTGGTGCAGAGCATCCCGTTCGTCCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTc                                                                                                                                   <  1:5266819/150‑1 (MQ=255)

             cgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTc                                                                                                                                   <  1:2389677/150‑1 (MQ=255)

             cgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTc                                                                                                                                   <  2:521144/150‑1 (MQ=255)

              ggggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcg                                                                                                                                  <  2:1035986/150‑1 (MQ=255)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGTGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                 <  1:2266779/150‑1 (MQ=25)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                 <  1:1814479/150‑1 (MQ=25)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                 <  1:3895387/150‑1 (MQ=25)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                 <  2:403507/150‑1 (MQ=255)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                 <  1:4176727/150‑1 (MQ=255)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                 <  2:6336646/150‑1 (MQ=255)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                 <  2:6337223/150‑1 (MQ=255)

               gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATGTAGTGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                 <  2:4326202/150‑1 (MQ=25)

               cggCTGGCGGGCGAGGACCTGGAGGAGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                 <  2:6594023/149‑1 (MQ=21)

                ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                <  2:7125349/150‑1 (MQ=25)

                ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                <  2:6632278/150‑1 (MQ=255)

                ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                <  2:2311278/150‑1 (MQ=255)

                ggCTCGCGGGCTATGCGCCGGAGGGGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGAATTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                <  2:6383532/150‑1 (MQ=39)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGTTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                               <  2:2826133/150‑1 (MQ=255)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  1:633496/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  1:6599528/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  1:6599625/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  2:7882711/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  2:5709104/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  2:1813040/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  2:311035/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                               <  2:3513699/150‑1 (MQ=25)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                               <  1:6196626/150‑1 (MQ=255)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                               <  2:5792393/150‑1 (MQ=255)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                               <  1:4560626/150‑1 (MQ=255)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                               <  1:4290633/150‑1 (MQ=255)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                               <  1:331952/150‑1 (MQ=255)

                 gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                               <  2:4560007/150‑1 (MQ=255)

                  cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCggg                                                                                                                              <  2:1993377/150‑1 (MQ=255)

                  cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCggg                                                                                                                              <  2:1993559/150‑1 (MQ=255)

                   tGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGt                                                                                                                             <  2:6363545/150‑1 (MQ=255)

                   tGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGt                                                                                                                             <  1:4717587/150‑1 (MQ=255)

                      cGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTaaa                                                                                                                          <  2:7645890/150‑1 (MQ=255)

                       gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑c                                                                                                                        <  1:5781377/150‑1 (MQ=255)

                       gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑c                                                                                                                        <  2:2815526/150‑1 (MQ=255)

                           tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGc                                                                                                                    <  2:2425439/150‑1 (MQ=255)

                                                                 ggggATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAACCGCGAATGCGAGGGTGACACCCCCGACCCAGTCGCGGGTAAA‑CCCCCACCAACAGGGGCCATTGTGCTTTTTTCAGGGCGGGGtt                                                                              >  2:2473703/1‑149 (MQ=37)

                                                                                                                tGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCACGCATTCGCGGGGAAA‑CCCGCCCCGACAGGGCCCGTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCGCTTGCCAAAAAAATTGAATACCataa                               >  1:4824143/1‑150 (MQ=18)

                                                                                                                       gCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCGCTTGCCAAAATCTTGGAATACCATAATATGata                        >  2:4396580/1‑150 (MQ=21)

                                                                                                                         gggTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATc                      >  1:7934315/1‑150 (MQ=255)

                                                                                                                           gTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                    >  2:6165136/1‑150 (MQ=255)

                                                                                                                            tttACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGAAATCCCg                   >  2:5303590/1‑150 (MQ=255)

                                                                                                                                cccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGa               >  2:4214700/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:1754840/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:196442/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:7719274/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:6446946/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:2246164/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:2811000/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:1846630/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:4588057/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑ACCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:6730670/1‑150 (MQ=25)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGc                                                                         <  1:6141573/91‑1 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGc                                                                         <  1:6141868/91‑1 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGc                                                                         >  2:6141973/1‑91 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGc                                                                         >  2:6141573/1‑91 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:4632960/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:4569268/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:6139253/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:1650109/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:3774826/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:2481951/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:4727921/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:5119143/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  1:6341707/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:1084347/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc              >  2:3114648/1‑150 (MQ=255)

                                                                                                                                 ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGC‑TTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  2:2133009/1‑150 (MQ=255)

                                                                                                                                  cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  1:3707567/1‑150 (MQ=25)

                                                                                                                                  cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                          <  1:2916776/121‑1 (MQ=255)

                                                                                                                                  cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  1:4230092/1‑150 (MQ=255)

                                                                                                                                  cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  1:3208631/1‑150 (MQ=255)

                                                                                                                                  cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  1:4161252/1‑150 (MQ=255)

                                                                                                                                  cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  2:343786/1‑150 (MQ=255)

                                                                                                                                  cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  1:641467/1‑150 (MQ=255)

                                                                                                                                  cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc             >  1:810351/1‑150 (MQ=255)

                                                                                                                                   gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt            >  2:3122543/1‑150 (MQ=25)

                                                                                                                                   gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt            >  1:3106777/1‑150 (MQ=25)

                                                                                                                                   gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt            >  2:7611631/1‑150 (MQ=25)

                                                                                                                                   gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt            >  2:4180053/1‑150 (MQ=25)

                                                                                                                                   gcgAATGCGTCGGTGGGGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt            >  2:5224708/1‑150 (MQ=37)

                                                                                                                                   gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGCAGACCt            >  1:7347664/1‑150 (MQ=255)

                                                                                                                                     gAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCCTACCTCTTGCCACAATCTTGGAATACCATAATATGATATCCCGTAGACCtgg          >  2:7895078/1‑148 (MQ=255)

                                                                                                                                        tGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt       >  2:6624747/1‑150 (MQ=255)

                                                                                                                                           gAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGTAATACCATAATATGATATACCGTAGACATTGAGTATg    >  1:5526254/1‑150 (MQ=255)

                                                                                                                                           gAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg    <  2:5904686/150‑1 (MQ=255)

                                                                                                                                           gAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg    >  1:1314366/1‑150 (MQ=255)

                                                                                                                                             gggTCACACCCCCGACGCATT‑GGGGGTAAACCCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCa  <  1:508870/150‑1 (MQ=255)

CCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCA  >  NC_002947/4339979‑4340269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`