| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 200407 | 50 (0.890) | 25 (0.660) +AGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCAT |
10/174 | 2.9 | 42.9% | coding (5913/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 217036 | 48 (0.860) | coding (22542/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
CCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/200325‑200407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGGTGCCGTTGGCCGGCACGGTGATGACGGT < NC_002947/217036‑217004 ||||||||||||||||||||||||||||||||||||||||| CCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGTTGGCCGGCACAGTGA < 2:1101050/150‑1CCACCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACAGTGA < 2:414995/150‑1 CCCCTTCGGTGACCGAAGGCGGTGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACTGTGCCGTTGGCCGGCACAGTGATGA < 2:310356/150‑1 CCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGAC < 2:87188/150‑1 ccgTCGGTGACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGCCG < 1:1476128/147‑1 GTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGAT < 1:211113/127‑1 GTGAGATCACTTACACCATTACCCTGACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGAT > 2:211113/1‑127 GATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACAGTGA > 1:279990/1‑122 GATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACAGTGA < 2:279990/122‑1 ACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGACGGT > 2:1092459/1‑119 ACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGACGGT < 1:1092459/119‑1 CCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGAC < 2:78059/108‑1 CCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGAC > 1:78059/1‑108 ACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCA > 2:712328/1‑76 ACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCA < 1:712328/76‑1 ACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGC > 1:833689/1‑52 ACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGC < 2:833689/52‑1 ACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGAT < 1:835262/101‑1 ACCAACAAAGACGGCTTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGAT > 2:835262/1‑101 CAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACAGTGAT < 1:679719/99‑1 CAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACAGTGAT > 2:679719/1‑99 AGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGTTGGCCGGCACGGTGA > 1:472980/1‑92 AGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGTTGGCCGGCACGGTGA < 2:472980/92‑1 ggctTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGT > 2:763894/5‑86 ggctTGCCGATCAATAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGT < 1:763894/82‑1 CGATCAACAACCACAGTGCATTGACCTTCACGCTGA < 2:799282/36‑1 CGATCAACAACCACAGTGCATTGACCTTCACGCTGA > 1:799282/1‑36 GATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAGACCGTCATCACGGTGCCGTTGGCCGGCACGGTG > 1:73150/1‑79 GATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAGACCGTCATCACGGTGCCGTTGGCCGGCACGGTG < 2:73150/79‑1 AACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGT < 1:1052804/47‑1 AACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGT > 2:1052804/1‑47 ||||||||||||||||||||||||||||||||||||||||| CCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/200325‑200407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGGTGCCGTTGGCCGGCACGGTGATGACGGT < NC_002947/217036‑217004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |