New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 181541	NA (NA)	38 (0.680)	17/258	2.9	NA	intergenic (+7/‑126)	PP_23SB/PP_r01	23S ribosomal RNA/5S ribosomal RNA
	?	NC_002947	= 529685	NA (NA)					intergenic (+18/‑102)	PP_23SC/PP_5SC	23S ribosomal RNA/5S ribosomal RNA

ACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCC  >  NC_002947/529577‑529828                                                                                                             |                                                                                                                                                  aCTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGc                                                                                                          <  2:261661/150‑1 (MQ=33)   tACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCca                                                                                                        >  2:311479/1‑150 (MQ=35)         gTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAata                                                                                                  >  2:502133/1‑150 (MQ=40)          ttGATTGGTTGGGGGAGTGATCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAatat                                                                                                 <  2:1150905/150‑1 (MQ=14)           tGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATc                                                                                                <  1:311479/150‑1 (MQ=255)           tGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATc                                                                                                <  1:902950/150‑1 (MQ=255)                        gtgtAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGc                                                                                              >  1:248215/1‑139 (MQ=255)                        gtgtAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGc                                                                                              <  2:248215/139‑1 (MQ=255)                             aGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTg                                                                             <  2:1200576/150‑1 (MQ=255)                                                cTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACAtt                                                         >  2:720714/1‑150 (MQ=255)                                                     cAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGAGAGGACGCAGGAGCCGGGGAAGCGTTAGGCGACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCGGGGCATTCTGGc                                                    >  1:846998/1‑150 (MQ=18)                                                        tACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCat                                                                                            <  1:957797/109‑1 (MQ=255)                                                        tACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATGGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCat                                                                                            >  2:957797/1‑109 (MQ=255)                                                                 tctatGAGGCTTGAGCAGAGTACTCGCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCt                                        <  2:320048/146‑1 (MQ=21)                                                                 cccGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCt                                        >  1:320048/1‑150 (MQ=255)                                                                   cGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATCCGTACGGCCACACACATC‑CA‑ATCTGGCTCTGTCTGGGTTTTTGCATCTGGACATTCTGGCAACAGAATTTCTTg                                      <  1:772822/150‑1 (MQ=9)                                                                     tGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATCCTGGCAACAGAATTTCTTgac                                    <  1:189735/150‑1 (MQ=255)                                                                                 atatAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCa                        >  2:315933/1‑150 (MQ=255)                                                                                    taACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTg                     <  1:720714/150‑1 (MQ=255)                                                                                     aaCACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCt                                                                <  2:1472275/106‑1 (MQ=255)                                                                                     aaCACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCt                                                                >  1:1472275/1‑106 (MQ=255)                                                                                        acCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAac                 >  2:1053133/1‑150 (MQ=255)                                                                                        acCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAac                 >  2:758088/1‑150 (MQ=255)                                                                                              gCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCAt                              >  2:122525/1‑131 (MQ=255)                                                                                              gCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCAt                              <  1:122525/131‑1 (MQ=255)                                                                                                       tACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGatcccatcc  >  2:64610/1‑150 (MQ=255)                                                                                                             |                                                                                                                                                  ACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAAT‑TCGCTGGG‑CTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCC  >  NC_002947/529577‑529828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.