| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2553673 = | NA (NA) | 29 (0.530) | 16/250 | 2.9 | 75.5% | intergenic (+12/‑120) | PP_23SF/PP_5SF | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_002947 | = 5307721 | 10 (0.170) | intergenic (‑117/+15) | PP_5SG/PP_23SG | 5S ribosomal RNA/23S ribosomal RNA | |||||
TTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCA > NC_002947/5307579‑5307870 | ttCCAATGCTCTATGGTCGTCAAGAAAGCTTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcag < 1:1380667‑M2/150‑8 (MQ=255) tCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcaga < 2:1436503‑M2/150‑9 (MQ=255) gccaATGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcaga > 2:711915‑M2/2‑142 (MQ=255) aaTGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtac > 1:755725‑M2/1‑139 (MQ=255) aaTGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtac < 2:755725‑M2/142‑4 (MQ=255) aaTGCTCTATGGGCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTg > 2:801024/1‑150 (MQ=17) tGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCTCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcagattgtg > 2:1380667‑M2/1‑137 (MQ=255) tGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcagattgtg > 1:1436503‑M2/1‑137 (MQ=255) tGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCGCGATCTGCtacgcagattgcg > 2:1411693‑M2/1‑137 (MQ=255) ctctATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTg > 2:421599/1‑150 (MQ=32) ctctATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcagatt > 1:174030‑M2/1‑135 (MQ=255) ctctATGGTCGTCAAGAAATCCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcagatt < 2:174030‑M2/145‑11 (MQ=255) tctATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCGCAATCTGCtacgcagattgcggtg > 2:20129‑M2/1‑134 (MQ=255) tATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGgt < 2:1329337/150‑1 (MQ=32) tATGGTCGTCAAGAAATTCTGTTGCCGGAATGCCACTATAGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGgt > 1:1230685/1‑150 (MQ=11) gtcgtcAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCATCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTta < 1:901655/150‑1 (MQ=17) tcgtcAAGAAATTCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCGCAATCTGCtacgcagattgcggt > 1:1312772‑M2/1‑127 (MQ=255) tcgtcAAGAAATTCTGTTGCCAGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCGCAATCTGCtacgcagattgcggt < 2:1312772‑M2/142‑16 (MQ=255) gtcAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGC < 2:510402‑M2/125‑1 (MQ=255) gtcAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGC > 1:510402‑M2/1‑125 (MQ=255) tcAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATg > 2:988205/1‑150 (MQ=32) aaGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGt > 2:75570/1‑150 (MQ=32) tGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTg < 1:1021486/124‑1 (MQ=33) tGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTg > 2:1021486/1‑124 (MQ=33) gATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcagatt < 2:314877‑M2/77‑11 (MQ=255) gATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCtacgcagatt > 1:314877‑M2/1‑67 (MQ=255) cGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctg < 2:851873‑M2/132‑94 (MQ=255) cGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctg > 1:851873‑M2/1‑39 (MQ=255) cGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGAAGACTacgacgttgata < 2:1480123/150‑7 (MQ=1) tttCGTCTTCACCACCACAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattccggcaacagaatttctt < 2:1138188‑M2/150‑126 (MQ=255) tttCGTCTTCACCACCACAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaa < 2:429868‑M2/79‑55 (MQ=255) tttCGTCTTCACCACCACAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaa > 1:429868‑M2/1‑25 (MQ=255) accaccacAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattccggcaacagaatttcttgacgaccata < 1:19146‑M2/150‑136 (MQ=255) caccacAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattccggcaacagaatttcttgacgaccataga < 1:305243‑M2/150‑138 (MQ=255) caccacAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattccggcaacagaatttcttgacgaccataga < 1:500530‑M2/150‑138 (MQ=255) caccacAATCTGCgtagcagattgcggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccataga < 1:937186‑M2/150‑138 (MQ=255) ccacAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccatagagc < 2:292350‑M2/150‑140 (MQ=255) ccacAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctatagattcttgcaacagaatttcttgacgaccatagagc < 2:722126‑M2/150‑140 (MQ=255) ccacAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctg < 1:361437‑M2/99‑89 (MQ=255) ccacAATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctg > 2:361437‑M2/1‑11 (MQ=255) cacaATCTGCgtagcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccatagagca < 1:17396‑M2/150‑141 (MQ=255) caATCTGCtacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccataga < 2:1263001‑M2/145‑138 (MQ=255) caATCTGCtacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccataga > 1:1263001‑M2/1‑8 (MQ=255) aaTCTGCtacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccatagagcattg > 2:1286422‑M2/1‑7 (MQ=255) aaTCTGCtacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctctacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccatagagcattg < 1:750807‑M2/150‑144 (MQ=255) tCTGCtacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccatagagcattgga < 1:164957‑M2/150‑146 (MQ=255) tCTGCtacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccatagagcattgga > 1:1350418‑M2/1‑5 (MQ=255) ctacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgcatatccgaattcgctgggctgtccatctggacattctggcaacagaatttcttgacgaccatagagcattggaacca > 1:72463‑M2/1‑1 (MQ=255) ctacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgca > 2:141813‑M2/1‑1 (MQ=255) ctacgcagattgtggtggtgaagacgaaagacccgaaaattcgtgctttacacaagagcttcgcaaatatcgca < 1:141813‑M2/74‑74 (MQ=255) | TTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTCA > NC_002947/5307579‑5307870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |