New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 337784 =58 (0.830)27 (0.490) 24/212 1.8 47.5% intergenic (‑31/+98) PP_0279/PP_0280 hypothetical protein/amino acid ABC transporter permease
?NC_002947 337868 = 14 (0.250)intergenic (‑115/+14) PP_0279/PP_0280 hypothetical protein/amino acid ABC transporter permease

ACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATG  >  NC_002947/337794‑338017
                                                                           |                                                                                                                                                     
ACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCa                                                                            <  2:564133‑M1/150‑1 (MQ=255)
ACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGTAAGTGATGTTTCTGCGGCCTTGGCAGGCATCCACGAGCAACCAGCGATCCAGCACCTTGAAGCATtgcagca                                                                            <  2:328797‑M1/150‑4 (MQ=255)
    CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCAc                                                                                                                  >  2:1541313‑M1/1‑108 (MQ=255)
    CCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCAc                                                                                                                  <  1:1541313‑M1/108‑1 (MQ=255)
    CCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCAt                                                                        <  1:1016984‑M1/150‑1 (MQ=255)
          ccgacaggtgtagcgccaaccttgaatgcggcgatatacggctgtgaccgggcgtgccagcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACg                                                                   >  2:25850‑M2/66‑150 (MQ=255)
          cccacaggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgctaagCAGTCAGTGa                                                                                                                                              <  1:667431‑M2/10‑1 (MQ=255)
          cccacaggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgctaagCAGTCAGTGa                                                                                                                                              >  2:667431‑M2/66‑75 (MQ=255)
          CCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                                                  <  1:248229‑M1/150‑1 (MQ=255)
          CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGca                                                                                                                                                      >  2:1609456‑M1/1‑66 (MQ=255)
          CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGca                                                                                                                                                      <  1:1609456‑M1/66‑1 (MQ=255)
          CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                                                  <  1:1262481‑M1/150‑1 (MQ=255)
          CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                                                  <  2:228755‑M1/150‑1 (MQ=255)
          CCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGGCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                                                  <  1:917189‑M1/150‑1 (MQ=255)
           CACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgag                                                                 <  1:1111483‑M1/150‑1 (MQ=255)
            cacaggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTgg                                                                                                                             <  2:466467‑M2/27‑1 (MQ=255)
            cacaggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTgg                                                                                                                             >  1:466467‑M2/64‑90 (MQ=255)
            cacaggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgag                                                                 >  1:294649‑M2/64‑150 (MQ=255)
            ACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCa                                                                               <  2:1158809‑M1/135‑1 (MQ=255)
            ACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCa                                                                               >  1:1158809‑M1/1‑135 (MQ=255)
            ACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgaga                                                                <  1:1604686‑M1/150‑1 (MQ=255)
             acaggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACgaga                                                                >  2:666328‑M2/63‑150 (MQ=255)
              caggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGAt                                                               <  1:666328‑M2/89‑1 (MQ=255)
              caggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGAt                                                               >  1:1572726‑M2/62‑150 (MQ=255)
              AGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATc                                                              <  1:428892‑M1/150‑1 (MQ=255)
                ggtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCa                                                             >  2:1581944‑M2/60‑150 (MQ=255)
                GTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGca                                                                                                                                                      >  1:843636‑M1/1‑60 (MQ=255)
                GTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGca                                                                                                                                                      <  2:843636‑M1/60‑1 (MQ=255)
                GTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCAc                                                            <  1:908457‑M1/150‑1 (MQ=255)
                GTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCAc                                                            <  2:402484‑M1/150‑1 (MQ=255)
                  gtgtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCAcc                                                           >  1:1637248‑M2/58‑150 (MQ=255)
                   gtagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagca                                                                                                                                                      >  2:1658720‑M2/57‑58 (MQ=255)
                   gtagcgccaaccttgaaagtggcgctatacctgtgggagcgggcgtgcccgcgaagca                                                                                                                                                      <  1:1658720‑M2/2‑1 (MQ=255)
                    tagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCtt                                                                                                                               >  2:696091‑M2/56‑80 (MQ=255)
                    tagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCtt                                                                                                                               <  1:696091‑M2/25‑1 (MQ=255)
                    tagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTggcagg                                                                                                                         >  2:1018287‑M2/56‑86 (MQ=255)
                    tagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTggcagg                                                                                                                         <  1:1018287‑M2/31‑1 (MQ=255)
                    tagcgccaaccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAg                                                         >  1:515044‑M2/56‑150 (MQ=255)
                    tagcgccaaccttgaatgtggcgctacacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGaa                                                                     <  2:140827‑M2/83‑1 (MQ=255)
                    tagcgccaaccttgaatgtggcgctacacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGaa                                                                     >  1:140827‑M2/56‑138 (MQ=255)
                     gcgcCACATTCCAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTg                                                                                 <  1:92206/124‑1 (MQ=255)
                     gcgcCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTg                                                                                 >  2:92206/1‑124 (MQ=255)
                     gcgcCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGt                                                       <  2:1262481/150‑1 (MQ=255)
                       gcCACATTCAAGGTTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGt                                                       >  1:379810/1‑148 (MQ=255)
                       gcCACATTCAAGGTTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGt                                                       <  2:379810/148‑1 (MQ=255)
                        ccACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGa                                                    >  2:496821/1‑150 (MQ=255)
                           caaccttgaatgtggcgctatacctgtgggagcgggcgtgccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAac                                                  <  2:1637248‑M2/102‑1 (MQ=255)
                             ccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTggca                                                                                                                           <  2:1154889‑M2/29‑1 (MQ=255)
                             ccttgaatgtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTggca                                                                                                                           >  1:1154889‑M2/47‑75 (MQ=255)
                                 aaGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                                                  >  2:54808/1‑128 (MQ=255)
                                 aaGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACga                                                                  <  1:54808/128‑1 (MQ=255)
                                    gTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTgcg                                         >  1:854332/1‑150 (MQ=255)
                                     ttGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGAAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTgcgg                                        <  1:564133/150‑1 (MQ=255)
                                     gtggcgctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTgcgg                                        <  2:294649‑M2/112‑1 (MQ=255)
                                        gcgcTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGc                                                                                <  1:206204/107‑1 (MQ=255)
                                        gcgcTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGc                                                                                >  2:206204/1‑107 (MQ=255)
                                           ctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTc                                                                                                   >  1:73841‑M2/33‑85 (MQ=255)
                                           ctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTc                                                                                                   <  2:73841‑M2/53‑1 (MQ=255)
                                           ctatacctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCgaaga                                  >  1:1174145‑M2/33‑150 (MQ=255)
                                            tACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCgaagaa                                 >  1:438998/1‑150 (MQ=255)
                                            tACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCgaagaa                                 <  2:854332/150‑1 (MQ=255)
                                               acctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGAt                              >  2:1331137‑M2/29‑150 (MQ=255)
                                               acctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCAGCCGCGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCATCAGCATGAGCGAGATCACCAGGGAGAACGCGCCTGCGGGGGAGAAGAt                              >  1:366635‑M2/29‑150 (MQ=255)
                                                cctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAAc                                                                                                           >  2:1719784‑M2/28‑72 (MQ=255)
                                                cctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAAc                                                                                                           <  1:1719784‑M2/45‑1 (MQ=255)
                                                cctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGAtt                             <  2:1174145‑M2/123‑1 (MQ=255)
                                                cctgtgggagcgggcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGAtt                             <  1:496821‑M2/123‑1 (MQ=255)
                                                             gcgtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCaggt                <  2:438998‑M2/136‑1 (MQ=255)
                                                              ngtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCaggta               >  2:1288724‑M2/14‑150 (MQ=255)
                                                               gtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTc                                                                                                   <  2:760232‑M2/53‑1 (MQ=255)
                                                               gtgcccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTc                                                                                                   >  1:760232‑M2/13‑65 (MQ=255)
                                                                  cccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGaa                                                                                       <  2:580105‑M2/65‑1 (MQ=255)
                                                                  cccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGaa                                                                                       >  1:580105‑M2/10‑74 (MQ=255)
                                                                   ccgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGc          >  1:369258‑M2/9‑150 (MQ=255)
                                                                    cgcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCg         >  1:545494‑M2/8‑150 (MQ=255)
                                                                     gcgaagCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCgg        <  2:248229‑M2/144‑1 (MQ=255)
                                                                         agCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGa    <  1:25850‑M2/148‑1 (MQ=255)
                                                                           cagtcagtGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCgatg  <  2:1572726/150‑1 (MQ=255)
                                                                           cagtcagtGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCgatg  >  1:1438118/1‑150 (MQ=255)
                                                                           cagtcagtGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCgatg  >  1:1217603/1‑150 (MQ=255)
                                                                           |                                                                                                                                                     
ACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATG  >  NC_002947/337794‑338017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.