New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 430692 | 43 (1.360) | 5 (0.160) | 5/240 | NT | 11.3% | coding (1625/1938 nt) | PP_0354 | CBS domain‑containing protein |
? | NC_002947 | = 430723 | 37 (1.210) | coding (1594/1938 nt) | PP_0354 | CBS domain‑containing protein |
TGGATGAAGTGGTAGGCCTCTTCATAGGCGGCGCCGTCCAACGGTTCGATCACGCCCTTGGCTACCAGTTGGCGCAGGCGCTCCAGGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/430545‑430692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGCGACCCTCGACCTCAAGGTCCAGGGCCTGACGCCCTTC < NC_002947/430723‑430685 TGGATGAAGTGGTAGGCCTCTTCATAGGCGGCGCCGTCCAACGGTTCGATCACGCCCTTGGCTACCAGTTGGCGCAGGCGCTCCAGGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGC < 1:222532/147‑1 TGGATGAAGTGGTAGGCCTCTTCATAGGCGGCGCCGTCCAACGGTTCGATCACGCCCTTGGCTACCAGTTGGCGCAGGCGCTCCAGGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGC > 2:222532/1‑147 CTTCATAGGCGGCGCCGTCCAACGGTTCGATCACGCCCTTGGCTACCAGTTGGCGCAGGCGCTCCAGGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGCGGCGACCCTCGACCTCAAGGTC > 2:345693/1‑150 CGCCGTCCAACGGTTCGATCACGCCCTTGGCTACCAGTTGGCGCAGGCGCTCCAGGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGCGGCGACCCTCGACCTCAAGGTCCAGGGCCTGACG < 1:345693/150‑1 CCAACGGTTCGATCACGCCCTTGGCTACCAGTTGGCGCAGGCGCTCCAGGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGCGGCGACCCTCGACCTCAAGGTCCAGGGCCTGACGCCCTTC < 2:492667/150‑1 GGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAATGGCGGCGACCCTCGACCTCAAGGTCCAGGGCCTGACGC < 1:233823/97‑1 GGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGCGGCGACCCTCGACCTCAAGGTCCAGGGCCTGACGC > 2:233823/1‑97 TGGATGAAGTGGTAGGCCTCTTCATAGGCGGCGCCGTCCAACGGTTCGATCACGCCCTTGGCTACCAGTTGGCGCAGGCGCTCCAGGGTATTGCAGGCAGCTATGCCATTGGCCAGGGCCAGCAAACGGGCACCATCCACGAAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/430545‑430692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGCGACCCTCGACCTCAAGGTCCAGGGCCTGACGCCCTTC < NC_002947/430723‑430685 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |