| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1838723 | 41 (1.290) | 6 (0.200) | 6/230 | NT | 12.9% | coding (488/606 nt) | PP_1644 | NAD(P)H dehydrogenase |
| ? | NC_002947 | = 1838742 | 43 (1.460) | coding (469/606 nt) | PP_1644 | NAD(P)H dehydrogenase | |||||
GCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTC‑GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1838588‑1838723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggtggcGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAG < NC_002947/1838742‑1838595 GCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTC‑GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGG > 2:430020/1‑150 TGGGCTTTCTAGCCACGCGCCGCCTCAAGGGCCTTCG‑TGGGGTCTGCCAGTCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCA < 1:828063/150‑1 CTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTC‑GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGCAG < 1:430020/150‑1 AGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTC‑GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCTACCACGCAGGC < 2:675696/150‑1 CTTGGCCGTGGTC‑GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGC < 1:34043/124‑1 CTTGGCCGTGGTC‑GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGC > 2:34043/1‑124 GTGGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCC > 1:255547/1‑150 GGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAA < 1:628262/150‑1 GGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAA < 1:830759/150‑1 GCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCGAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAG < 2:593567/150‑1 GCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAG > 1:834246/1‑150 GCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAG < 2:834246/150‑1 GCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTC‑GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1838588‑1838723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggtggcGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAG < NC_002947/1838742‑1838595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |