| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1967188 = | 18 (0.570) | 6 (0.260) | 6/182 | NT | 35.1% | intergenic (+15/+104) | PP_1762/yciK | hypothetical protein/putative oxidoreductase |
| ? | NC_002947 | 1967284 = | 9 (0.390) | intergenic (+111/+8) | PP_1762/yciK | hypothetical protein/putative oxidoreductase | |||||
CATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1967364‑1967188‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCC > NC_002947/1967284‑1967418 CATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTG < 2:371260/150‑1 GGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGAGGGCGCAATCCTTGGGGGGTGCGGTGATACTGGGGGAGCG > 1:223309/1‑150 GCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATC < 1:413803/118‑1 GCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATC > 2:413803/1‑118 CTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTG < 1:334682/75‑1 CTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTG > 2:334682/1‑75 CCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGT < 1:633880/96‑1 CCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGT > 2:633880/1‑96 CCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCG < 1:744462/76‑1 CCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCG > 2:744462/1‑76 CGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACC < 1:278788/114‑1 CGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACC > 2:278788/1‑114 CCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCAT > 1:691261/1‑150 GCGCAATCCTTGAGGGTTGCGGCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGG > 1:561727/1‑150 TGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTT < 2:691261/150‑1 GGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTA > 2:139172/1‑87 GGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTA < 1:139172/87‑1 CCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCC < 2:561727/150‑1 CCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGG > 1:805410/1‑135 CCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGG < 2:805410/135‑1 CATGCCGGTGTACCTGTACCTGATGGGGCCGGACAGCACAGGGGTGAACGGGCAGGCGTTCAACGCCCAATAAACCTGCATCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1967364‑1967188‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcaagcccgcgaagaggccgATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTGTTCTGCGGGTTCTCGCCGGGGTAGGCCTGGGCC > NC_002947/1967284‑1967418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |