New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3762255 =34 (1.070)3 (0.100) 3/238 NT 8.7% coding (1560/2091 nt) PP_3325 ferric siderophore receptor
?NC_002947 3762272 = 30 (0.990)coding (1577/2091 nt) PP_3325 ferric siderophore receptor

GTCAGTTGGCCGCTGAACTGCAGGTCCAGGCCTTGGCTGCGCGCTTCGCCCGCCGCCACGCTCTCGCCAAGGGCGTCGGTGGTGATGACGTTCTCCTTGTCGATATGGAACAGGGCGATGGTCGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3762383‑3762255
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACAT  >  NC_002947/3762272‑3762419
                                                                                                                                                                                                                                                                                      
GTCAGTTGGCCGCTGAACTGCAGGTCCAGGCCTTGGCTGCGCGCTTCGCCCGCCGCCACGCTCTCGCCAAGGGCGTCGGTGGTGATGACGTTCTCCTTGTCGATATGGAACAGGGCGCGACCATCGCCCTGTTCCATATCGACAAGGAGA                                                                                                                                 <  1:594618/150‑1
                                                                                                         TGGAACAGGGCGATGGTCGCGCCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGTCGAGAGCGTGGCGGCGGGC                                                                                     >  1:487997/1‑89
                                                                                                         TGGAACAGGGCGATGGTCGCGCCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGC                                                                                     <  2:487997/89‑1
                                                                                                                               CCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACA   <  1:48969/150‑1
                                                                                                                               CCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACA   >  1:703686/1‑150
                                                                                                                                CCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGCCGCGAGCGTGGCGCCGTGCGATGCGCGCAGCCAAGGCCTGGACCTGCAGTGCAGCGGCCAACTGACCGACGCGTCGCGAGTGATCGGCGCCTACGCCTACAT  >  2:316824/1‑150
                                                                                                                                                                                                                                                                                      
GTCAGTTGGCCGCTGAACTGCAGGTCCAGGCCTTGGCTGCGCGCTTCGCCCGCCGCCACGCTCTCGCCAAGGGCGTCGGTGGTGATGACGTTCTCCTTGTCGATATGGAACAGGGCGATGGTCGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3762383‑3762255
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACAT  >  NC_002947/3762272‑3762419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.