New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3762255 = | 34 (1.070) | 3 (0.100) | 3/238 | NT | 8.7% | coding (1560/2091 nt) | PP_3325 | ferric siderophore receptor |
? | NC_002947 | 3762272 = | 30 (0.990) | coding (1577/2091 nt) | PP_3325 | ferric siderophore receptor |
GTCAGTTGGCCGCTGAACTGCAGGTCCAGGCCTTGGCTGCGCGCTTCGCCCGCCGCCACGCTCTCGCCAAGGGCGTCGGTGGTGATGACGTTCTCCTTGTCGATATGGAACAGGGCGATGGTCG‑CGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3762383‑3762255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACAT > NC_002947/3762272‑3762419 GTCAGTTGGCCGCTGAACTGCAGGTCCAGGCCTTGGCTGCGCGCTTCGCCCGCCGCCACGCTCTCGCCAAGGGCGTCGGTGGTGATGACGTTCTCCTTGTCGATATGGAACAGGGCG‑CGACCATCGCCCTGTTCCATATCGACAAGGAGA < 1:594618/150‑1 TGGAACAGGGCGATGGTCG‑CGCCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGTCGAGAGCGTGGCGGCGGGC > 1:487997/1‑89 TGGAACAGGGCGATGGTCG‑CGCCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGC < 2:487997/89‑1 CCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACA < 1:48969/150‑1 CCCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACA > 1:703686/1‑150 CCTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGCCGCGAGCGTGGCGCCGTGCGATGCGCGCAGCCAAGGCCTGGACCTGCAGTGCAGCGGCCAACTGACCGACGCGTCGCGAGTGATCGGCGCCTACGCCTACAT > 2:316824/1‑150 GTCAGTTGGCCGCTGAACTGCAGGTCCAGGCCTTGGCTGCGCGCTTCGCCCGCCGCCACGCTCTCGCCAAGGGCGTCGGTGGTGATGACGTTCTCCTTGTCGATATGGAACAGGGCGATGGTCG‑CGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3762383‑3762255 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccTGTTCCATATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACAT > NC_002947/3762272‑3762419 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |