| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5537105 | 23 (0.730) | 6 (0.240) | 4/194 | NT | 22.2% | intergenic (+34/+69) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin |
| ? | NC_002947 | = 5537127 | 24 (0.970) | intergenic (+56/+47) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin | |||||
GGACGAGGCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5536930‑5537105‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggagcgggttcacccgcgaatGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAACCGGCT < NC_002947/5537127‑5536986 GGACGAGGCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGC > 2:850597/1‑150 TCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGCGC < 1:850597/150‑1 TCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGC > 1:756655/1‑150 CTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGTTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGA > 1:416134/1‑150 TTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACC > 1:294233/1‑150 AGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:294233/150‑1 AGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:416134/150‑1 TGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACC < 2:457011/150‑1 CCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:645048/98‑1 CCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG > 1:645048/1‑98 CCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGCTTCACCATCCTGTGCACCGGGGAACCCGCTCCGTCGGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAAC > 1:445554/1‑150 TGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGC > 2:174125/1‑150 AGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGC > 1:710579/1‑150 AGGAGCGGGTTCACCCGCGAATGCGTCGGTGCGTTACCCGTCGTATTCGCGGGTGGGCCCGCGCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGC < 2:416381/150‑1 GGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTACTGGGCGACGATGATGTCGAACGCTGCC < 1:794722/150‑1 GTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAA > 2:836173/1‑150 GTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAG > 2:467065/1‑75 GTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAG < 1:467065/75‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCGGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAACCGGCT < 2:157701/150‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCT > 1:500374/1‑138 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCT < 2:500374/138‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTC > 1:571214/1‑85 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTC < 2:571214/85‑1 CGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATG < 2:507385/124‑1 CGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATG > 1:507385/1‑124 GGACGAGGCGTCACATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5536930‑5537105‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggagcgggttcacccgcgaatGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAACCGGCT < NC_002947/5537127‑5536986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |