| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6078032 = | 43 (1.360) | 3 (0.100) | 3/240 | NT | 6.0% | coding (1250/1290 nt) | PP_5330 | MFS transporter |
| ? | NC_002947 | 6078076 = | 53 (1.730) | coding (1206/1290 nt) | PP_5330 | MFS transporter | |||||
CCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6078076‑6078032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGG > NC_002947/6078076‑6078181 CCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTA > 1:65475/1‑102CCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTA < 2:65475/102‑1 CCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGCACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGG > 1:658018/1‑150 CCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6078076‑6078032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGG > NC_002947/6078076‑6078181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |