New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1034745 =24 (0.760)3 (0.100) 3/238 NT 11.3% coding (779/1158 nt) PP_0892 phospholipase family protein
?NC_002947 1034785 = 24 (0.790)coding (819/1158 nt) PP_0892 phospholipase family protein

AGGACATCCTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGTCAGCGTCGGT  >  NC_002947/1034598‑1034893
                                                                                                                                                   |                                                                                                                                                    
aGGACATCCTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGACGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCg                                                                                                                                                    <  2:802950/150‑1 (MQ=255)
              gcgcTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGAt                                                                                                                                      <  1:362458/150‑1 (MQ=255)
              gcgcTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGATGACCGGCCCTCGTACCGAt                                                                                                                                      <  2:253355/150‑1 (MQ=255)
              gcgcTGGTACGGGCGCTCAACAGCCTCCAGAAACGTGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGAt                                                                                                                                      <  2:173610/150‑1 (MQ=255)
                       cGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCg                                                                                                                             <  2:394478/150‑1 (MQ=255)
                        gggCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCgg                                                                                                                            >  2:387569/1‑150 (MQ=255)
                                    gaaccgacgctgacccagtcgtctaccacagccatcttcaggtgcaggaagcacggctggtactcgaaactccgttcgcccgcgcgcaacagacgcgggtagtaacgatgcCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCg                                                                                                                >  1:530437‑M1/112‑150 (MQ=255)
                                         cAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCAt                                                                                                           >  2:377898/1‑150 (MQ=255)
                                         cAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCAt                                                                                                           >  2:33680/1‑150 (MQ=255)
                                          aGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGACAACCTGGATCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCACGGGCCTGGTCGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATc                                                                                                          >  1:157411/1‑150 (MQ=255)
                                            aaaCGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGt                                                                                                        <  2:808989/150‑1 (MQ=255)
                                                             cACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCATCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGtt                                                                                       >  1:556294/1‑150 (MQ=255)
                                                             cACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGtt                                                                                       <  2:574309/150‑1 (MQ=255)
                                                              cacagccatcttcaggtgcaggaagcacggctggtactcgaaaatccgtacgcccgcgcgcaacagacgcgggtagtaacgatgcCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATc                                                                                                          <  2:27238‑M1/45‑1 (MQ=255)
                                                              cacagccatcttcagctgcaggaagcacggctggtactcgaaaatccgtacgcccgcgcgcaacagacgcgggtagtaacgatgcCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATc                                                                                                          >  1:27238‑M1/86‑130 (MQ=255)
                                                                gCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCgg                                                                                                               >  1:653040/1‑123 (MQ=255)
                                                                gCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCgg                                                                                                               <  2:653040/123‑1 (MQ=255)
                                                                     aCTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCgg                                                                               <  1:33680/150‑1 (MQ=255)
                                                                                   tGGAGCTTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc                                                                 >  2:673988/1‑150 (MQ=255)
                                                                                                ggTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGt                                                    <  1:377898/150‑1 (MQ=255)
                                                                                                                   cAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCg                                                                                                         >  2:306683/1‑78 (MQ=255)
                                                                                                                   cAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCg                                                                                                         <  1:306683/78‑1 (MQ=255)
                                                                                                                     gccaGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACGACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATgg                               <  2:40737/147‑1 (MQ=255)
                                                                                                                        aGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCtg                            <  2:746056/150‑1 (MQ=255)
                                                                                                                          ggCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCtgtg                          <  2:132083/150‑1 (MQ=255)
                                                                                                                                      cGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTgg              >  1:400536/1‑150 (MQ=255)
                                                                                                                                        tCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGt            >  2:240403/1‑150 (MQ=255)
                                                                                                                                          tgttgtTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGTCa          <  1:852835/150‑1 (MQ=255)
                                                                                                                                               ttgACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTgg                         >  1:435073/1‑130 (MQ=255)
                                                                                                                                               ttgACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTgg                         <  2:435073/130‑1 (MQ=255)
                                                                                                                                                  aCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGTCAGcgtcagt  >  2:556294‑M1/2‑147 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AGGACATCCTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGTCAGCGTCGGT  >  NC_002947/1034598‑1034893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.