New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2418440	35 (1.110)	3 (0.100)	3/238	NT	8.3%	coding (1432/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 2418467	33 (1.090)					coding (1459/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein

CAAAACCCCTCGCTGTTCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGTGCCCTTGATGCACAAAGTGAATACTTGATCCAGCAAGCGC  >  NC_002947/2418293‑2418587                                                                                                                                                    |                                                                                                                                                    caAAACCCCTCGCTGTTCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACGTGGGCTGGAGTCGCAGCAGCACCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTg                                                                                                                                                   >  1:505803/1‑150 (MQ=255)                ttCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATc                                                                                                                                    >  2:391711/1‑150 (MQ=255)                 tCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCg                                                                                                                                   <  1:315598/150‑1 (MQ=255)                  ccGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCgg                                                                                                                                  <  1:766429/150‑1 (MQ=255)                   cGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGc                                                                                                                                 <  2:582713/150‑1 (MQ=255)                       gCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCttt                                                                                                                             >  1:328384/1‑150 (MQ=255)                             tGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGgcg                                                                                                                       >  2:811588‑M2/1‑147 (MQ=255)                               gAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCcggaaaggccgatgccgccctcccccagcggg                                                                                                                     <  1:214573‑M1/150‑33 (MQ=255)                                  gCCAACATTCGTTATGGCCGGCCCGAGGCGACCCTGTTTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCaa                                                                                                                  >  1:839411/1‑150 (MQ=255)                                     atcATTCGTTATGTCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGTTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGc                                                                                                               >  2:214502/3‑150 (MQ=255)                                            gTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGcc                                                                                                        >  2:287624/1‑150 (MQ=255)                                                          gAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCgg                                                                                          <  2:771224/150‑1 (MQ=255)                                                           aGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCggg                                                                                         <  1:48175/150‑1 (MQ=255)                                                                aCCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCCACGCCAGCGCCTGGCGATTGCCCGGGCCTTg                                                                                    <  1:23518/150‑1 (MQ=255)                                                                   ttGGCTGAAGTCGAAGCAGCAGCCCGCGGAGCCCATGCGGACGAATTCATACGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTg                                                                                 <  2:415979/150‑1 (MQ=255)                                                                     ggCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGt                                                                               <  1:287624/150‑1 (MQ=255)                                                                      gCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTc                                                                              <  1:391711/150‑1 (MQ=255)                                                                        tGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGa                                                                            >  2:514526/1‑150 (MQ=255)                                                                         gAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGAt                                                                           <  1:27608/150‑1 (MQ=255)                                                                            gTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATgcg                                                                        >  2:590435/1‑150 (MQ=255)                                                                                aaGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGgagg                                                                                                                      >  1:359926‑M2/1‑96 (MQ=255)                                                                                aaGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGgagg                                                                                                                      <  2:359926‑M2/100‑5 (MQ=255)                                                                                  gcagcagcCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATc                                                                  <  1:590435/150‑1 (MQ=255)                                                                                   cagcagcCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCcggaaaggccgatgccgccctcccccagcggggtctg                                                                                                                >  2:420846‑M1/1‑66 (MQ=255)                                                                                   cagcagcCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCcggaaaggccgatgccgccctcccccagcggggtctg                                                                                                                <  1:420846‑M1/103‑38 (MQ=255)                                                                                        gcCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGGATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTg                                                            >  1:274645/1‑150 (MQ=255)                                                                                         cccGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCAGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGc                                                                                                    <  1:9440/109‑1 (MQ=255)                                                                                         cccGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCAGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGc                                                                                                    >  2:9440/1‑109 (MQ=255)                                                                                            gcggcgCCCATGCCGATGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTgg                                                        >  2:124381/1‑150 (MQ=255)                                                                                             cggcgCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGTTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGa                                                       <  1:214502/150‑1 (MQ=255)                                                                                               gcgcCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACg                                                     <  2:274645/150‑1 (MQ=255)                                                                                                         cgacgaATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGccacca                                            >  2:292031/1‑149 (MQ=255)                                                                                                         cgacgaATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGccacca                                            <  1:292031/149‑1 (MQ=255)                                                                                                         cgacgaATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAg                                           >  2:629852/1‑150 (MQ=255)                                                                                                          gacgaATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCCGCAAACGCCAGCGCCTGGCGATTGCCCGCCCATCACTGTTTGGGGCGGCGAGCCTGTTGCTGGACGAAGCCACCAGt                                          >  1:615739/1‑150 (MQ=255)                                                                                                               aTTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGTGCCCt                                     <  2:328384/150‑1 (MQ=255)                                                                                                               aTTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGTGCCCt                                     >  1:341777/1‑150 (MQ=255)                                                                                                                   aTCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGTGCCCTTGAt                                 >  2:364226/1‑150 (MQ=255)                                                                                                                      cGGCAATTGCCCCAAGGCTACCAGACCCCGCTtggg                                                                                                                                                <  2:824666/36‑1 (MQ=255)                                                                                                                      cGGCAATTGCCCCAAGGCTACCAGACCCCGCTgggg                                                                                                                                                >  1:824666/1‑36 (MQ=255)                                                                                                                                cccAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGaa                                                   <  1:362236/119‑1 (MQ=255)                                                                                                                                cccAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGaa                                                   >  2:362236/1‑119 (MQ=255)                                                                                                                                 ccAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGTGCCCTTGATGCACAAAGTGAATa                   >  1:547088/1‑150 (MQ=255)                                                                                                                                        tACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGTGCCCTTGATGCACAAAGTGAATACTTGATc            >  1:409433/1‑150 (MQ=255)                                                                                                                                           cAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGgcggggtctggtagccttggggcaattgccggatgaattcgtcggcatgggcgccgcgggctgctg                                                        >  2:420846‑M2/1‑37 (MQ=255)                                                                                                                                           cAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGgcggggtctggtagccttggggcaattgccggatgaattcgtcggcatgggcgccgcgggctgctg                                                        <  1:420846‑M2/103‑67 (MQ=255)                                                                                                                                                cccGCTGGGGGAGGGCGGCATCGGCCTTTCCGgcggggtctggtagccttggggcaattgccggatgaattcgtcggcatgggcgccgcgggctgctgcttcgacttcagccaaggtcgcctcgggccggccataacgaatgttggcctc    <  1:214573‑M2/150‑119 (MQ=255)                                                                                                                                                 cctccggaaaggccgatgccgccctcccccagcggggtctggtagccttggggcaattgccggatgaattcgtcggcatgggcgccgcgggctgctgctt                                                     >  1:359926‑M1/4‑4 (MQ=255)                                                                                                                                                 cctccggaaaggccgatgccgccctcccccagcggggtctggtagccttggggcaattgccggatgaattcgtcggcatgggcgccgcgggctgctgctt                                                     <  2:359926‑M1/97‑97 (MQ=255)                                                                                                                                                  cgccggaaaggccgatgccgccctcccccagcggggtctggtagccttggggcaattgccggatgaattcgtcggcatgggcgccgcgggctgctgcttcgacttcagccaaggtcgcctcgggccggccataacgaatgttggcctcca  >  2:811588‑M1/1‑3 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CAAAACCCCTCGCTGTTCCGTGGCACGGTGGAGGCCAACATTCGTTATGGCCGGCCCGAGGCGACCTTGGCTGAAGTCGAAGCAGCAGCCCGCGGCGCCCATGCCGACGAATTCATCCGGCAATTGCCCCAAGGCTACCAGACCCCGCTGGGGGAGGGCGGCATCGGCCTTTCCGGCGGGCAACGCCAGCGCCTGGCGATTGCCCGGGCCTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGTGCCCTTGATGCACAAAGTGAATACTTGATCCAGCAAGCGC  >  NC_002947/2418293‑2418587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.