New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 283742125 (0.790)5 (0.160) 5/238 NT 16.4% coding (954/1101 nt) PP_2489 xenobiotic reductase
?NC_002947 = 2837450 27 (0.890)coding (925/1101 nt) PP_2489 xenobiotic reductase

GATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCGGGATGTTGAA  >  NC_002947/2837272‑2837570
                                                                                                                                                     |                                                                                                                                                     
gATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCC                                                                                                                                                       >  1:440935‑M1/1‑150 (MQ=255)
                        tCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCg                                                                                                                               <  2:632009/150‑1 (MQ=255)
                                gTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggc                                                                                                                       <  2:283513‑M2/150‑4 (MQ=255)
                                    gCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGc                                                                                                                   <  1:283513/150‑1 (MQ=255)
                                      gTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCctggccgaccgcttggtgcgcgatggccaggcctatcag                                                                                                                >  2:196237‑M1/1‑111 (MQ=255)
                                                ggCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTAGCAGTTCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATAccc                                                                                                       <  2:502790/150‑1 (MQ=255)
                                                        ccATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCAAGGGCTGGCGACTCGATACCCCAGGCCgc                                                                                               <  2:402334/150‑1 (MQ=255)
                                                         cATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGAt                                                                                                           >  2:462412/1‑137 (MQ=255)
                                                         cATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGAt                                                                                                           <  1:462412/137‑1 (MQ=255)
                                                          aTGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCgcag                                                                                             >  2:127445/1‑150 (MQ=255)
                                                              ggggCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAAc                                                                                         >  2:628858/1‑150 (MQ=255)
                                                               gggCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACg                                                                                        >  2:766844/1‑150 (MQ=255)
                                                                ggCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGAGAGGGGGTGCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACgg                                                                                       <  2:542697/150‑1 (MQ=255)
                                                                   gcTCGACGCCAAGGGTGCTAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGaa                                                                                    >  2:613049/1‑150 (MQ=255)
                                                                     tCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctggtaatg                                                                                                          >  1:791140‑M1/1‑81 (MQ=255)
                                                                     tCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctggtaatg                                                                                                          <  2:791140‑M1/126‑46 (MQ=255)
                                                                     tCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATg                                                                                  >  1:375949/1‑150 (MQ=255)
                                                                        aCGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGccc                                                                               <  2:440935/150‑1 (MQ=255)
                                                                          gCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGc                                                                             >  1:342144/1‑150 (MQ=255)
                                                                            cAAGGGTGCGAGCTGCCGCGTATGGCCAATGTTGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctg                                                                                                                <  1:383244‑M1/113‑40 (MQ=255)
                                                                            cAAGGGTGCGAGCTGCCGCGTATGGCCAATGTTGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctg                                                                                                                >  2:383244‑M1/1‑74 (MQ=255)
                                                                             aaGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCCCCAAGCGGTCGGCCCGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTc                                                                          <  2:121845/150‑1 (MQ=255)
                                                                                      aGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTAt                                                                 <  1:127445/150‑1 (MQ=255)
                                                                                            cgcgTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTc                                                           <  1:851962/150‑1 (MQ=255)
                                                                                                      cAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGt                                                 >  2:478697/1‑150 (MQ=255)
                                                                                                              aTCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGaa                                         >  1:434555/1‑150 (MQ=255)
                                                                                                                         gggCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGcc                                     <  2:241219/143‑1 (MQ=255)
                                                                                                                         gggCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGcc                                     >  1:241219/1‑143 (MQ=255)
                                                                                                                            cccGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAgg                           <  2:342144/150‑1 (MQ=255)
                                                                                                                              cGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGa                         <  1:628858/150‑1 (MQ=255)
                                                                                                                               ggCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCTAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAg                        >  1:170090/1‑150 (MQ=255)
                                                                                                                                      cATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcga                                         >  1:791140‑M2/1‑45 (MQ=255)
                                                                                                                                      cATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcga                                         <  2:791140‑M2/126‑82 (MQ=255)
                                                                                                                                           ccAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCg            >  2:813098/1‑150 (MQ=255)
                                                                                                                                            ctgataggcctggccATCGCGCACCAAGCGGTCGGCCAGgctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcgagcgccccgcatgggtactgccccccccttac           >  2:196237‑M2/8‑39 (MQ=255)
                                                                                                                                            cAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatcaacattggccatacgcggcagctcgcacccttg                                                >  2:383244‑M2/1‑39 (MQ=255)
                                                                                                                                            cAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatcaacattggccatacgcggcagctcgcacccttg                                                <  1:383244‑M2/113‑75 (MQ=255)
                                                                                                                                                   gCCctggccgaccgcttggtgcgcgatggccaggctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcgagcgccccgcatgggtactgccccccccttacgcccac    <  2:283513‑M1/150‑148 (MQ=255)
                                                                                                                                                     cTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCGGGATGTTGaa  <  1:478697/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCGGGATGTTGAA  >  NC_002947/2837272‑2837570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.