New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2837421 | 25 (0.790) | 5 (0.160) | 5/238 | NT | 16.4% | coding (954/1101 nt) | PP_2489 | xenobiotic reductase |
? | NC_002947 | = 2837450 | 27 (0.890) | coding (925/1101 nt) | PP_2489 | xenobiotic reductase |
GATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCGGGATGTTGAA > NC_002947/2837272‑2837570 | gATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCC > 1:440935‑M1/1‑150 (MQ=255) tCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCg < 2:632009/150‑1 (MQ=255) gTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggc < 2:283513‑M2/150‑4 (MQ=255) gCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGc < 1:283513/150‑1 (MQ=255) gTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAG‑Cctggccgaccgcttggtgcgcgatggccaggcctatcag > 2:196237‑M1/1‑111 (MQ=255) ggCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTAGCAGTTCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATAccc < 2:502790/150‑1 (MQ=255) ccATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCAAGGGCTGGCGACTCGATACCCCAGGCCgc < 2:402334/150‑1 (MQ=255) cATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGAt > 2:462412/1‑137 (MQ=255) cATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGAt < 1:462412/137‑1 (MQ=255) aTGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCgcag > 2:127445/1‑150 (MQ=255) ggggCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAAc > 2:628858/1‑150 (MQ=255) gggCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACg > 2:766844/1‑150 (MQ=255) ggCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGAGAGGGGGTGCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACgg < 2:542697/150‑1 (MQ=255) gcTCGACGCCAAGGGTGCTAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGaa > 2:613049/1‑150 (MQ=255) tCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctggtaatg > 1:791140‑M1/1‑81 (MQ=255) tCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctggtaatg < 2:791140‑M1/126‑46 (MQ=255) tCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATg > 1:375949/1‑150 (MQ=255) aCGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGccc < 2:440935/150‑1 (MQ=255) gCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGc > 1:342144/1‑150 (MQ=255) cAAGGGTGCGAGCTGCCGCGTATGGCCAATGTTGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctg < 1:383244‑M1/113‑40 (MQ=255) cAAGGGTGCGAGCTGCCGCGTATGGCCAATGTTGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCctggccgaccgcttggtgcgcgatggccaggctgatctg > 2:383244‑M1/1‑74 (MQ=255) aaGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCCCCAAGCGGTCGGCCCGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTc < 2:121845/150‑1 (MQ=255) aGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTAt < 1:127445/150‑1 (MQ=255) cgcgTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTc < 1:851962/150‑1 (MQ=255) cAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGt > 2:478697/1‑150 (MQ=255) aTCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGaa > 1:434555/1‑150 (MQ=255) gggCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGcc < 2:241219/143‑1 (MQ=255) gggCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGcc > 1:241219/1‑143 (MQ=255) cccGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAgg < 2:342144/150‑1 (MQ=255) cGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGa < 1:628858/150‑1 (MQ=255) ggCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCTAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAg > 1:170090/1‑150 (MQ=255) cATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcga > 1:791140‑M2/1‑45 (MQ=255) cATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcga < 2:791140‑M2/126‑82 (MQ=255) ccAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCg > 2:813098/1‑150 (MQ=255) ctgataggcctggccATCGCGCACCAAGCGGTCGGCCAGgctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcgagcgccccgcatgggtactgccccccccttac > 2:196237‑M2/8‑39 (MQ=255) cAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatcaacattggccatacgcggcagctcgcacccttg > 2:383244‑M2/1‑39 (MQ=255) cAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGggctgatctggtaatggtcggccgggcccacctcgctgatcaacattggccatacgcggcagctcgcacccttg < 1:383244‑M2/113‑75 (MQ=255) gCCctggccgaccgcttggtgcgcgatggccaggctgatctggtaatggtcggccgggcccacctcgctgatccacattggccatacgcggcagctcgcacccttggcgtcgagcgccccgcatgggtactgccccccccttacgcccac < 2:283513‑M1/150‑148 (MQ=255) cTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCGGGATGTTGaa < 1:478697/150‑1 (MQ=255) | GATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCTGCCGCGTATGGCCAATGTGGATCAGCGAGGTGGGCCCGGCCGACCATTACCAGATCAGCCTGGCCATCGCGCACCAAGCGGTCGGCCAGGGCTGGCGACTCGATACCCCAGGCCGCAGCAACGGGAATGCCCGCCTCATGGCGTATGCGTTCGGCGATTGGTGCAAGGAATGCCGGTGCCCAGGGAGTGTCAGTGTTCGGGATGTTGAA > NC_002947/2837272‑2837570 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |