New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 326245334 (1.070)4 (0.130) 4/240 NT 10.8% coding (279/567 nt) PP_2860 nicotinamide mononucleotide transporter
?NC_002947 = 3262489 33 (1.080)coding (243/567 nt) PP_2860 nicotinamide mononucleotide transporter

CCACAGTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTAGAGCTTTA  >  NC_002947/3262306‑3262601
                                                                                                                                                   |                                                                                                                                                    
ccACAGTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCcggc                                                                                                                                                    >  2:677678/1‑150 (MQ=255)
     gTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCa                                                                                                                                               >  1:187082/1‑150 (MQ=255)
     gTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGCGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCa                                                                                                                                               <  2:206815/150‑1 (MQ=255)
        gCCAGCACTGCAGGCGTTTCTGCGCCATCCAAAATCGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGc                                                                                                                                            >  1:203442/1‑150 (MQ=255)
           aGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCCCGAGCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCtg                                                                                                                                         <  2:203442/150‑1 (MQ=255)
              aCTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGa                                                                                                                                      >  1:134655/1‑150 (MQ=255)
                               gcCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGc                                                                                                                     >  1:618858/1‑150 (MQ=255)
                                    ccACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcg                                                                                                                >  2:626287‑M2/1‑148 (MQ=255)
                                       caGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGga                                                                                                             <  1:677678/150‑1 (MQ=255)
                                                    aGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTggcgggcg                                                                                                >  1:483269/1‑150 (MQ=255)
                                                       cTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccg                                                                                                                >  1:575845‑M1/1‑93 (MQ=255)
                                                       cTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccg                                                                                                                <  2:575845‑M1/131‑39 (MQ=255)
                                                         gAATTCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCNTNTNAGCAGTGCCGGGCGNNGCAGACGGGAGACCTGGCGGGCGTCTTc                                                                                           <  1:552855/150‑1 (MQ=255)
                                                           aTCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAg                                                                                         >  2:26225/1‑150 (MQ=255)
                                                            tCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGc                                                                                        <  2:187082/150‑1 (MQ=255)
                                                              cGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGc                                                                                        <  1:414939/148‑1 (MQ=255)
                                                              cGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGc                                                                                        >  2:414939/1‑148 (MQ=255)
                                                               ggTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTg                                                                                     >  1:606887/1‑150 (MQ=255)
                                                                     ggTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCggg                                                                               <  2:483269/150‑1 (MQ=255)
                                                                         gCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGgcgc                                                                           >  2:787331/1‑150 (MQ=255)
                                                                            tCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccgg                                                                                                               >  2:176569‑M1/1‑72 (MQ=255)
                                                                            tCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGtctgccacgcccggcactgctcacaggcctggccgccgg                                                                                                               <  1:176569‑M1/111‑40 (MQ=255)
                                                                                gccagGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCAtt                                                                    <  1:63755/150‑1 (MQ=255)
                                                                                                     tCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCa                                               >  2:697899/1‑150 (MQ=255)
                                                                                                      ccAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGAAGACGGGAGACCTGGCGAGTGATTATAACATGGGCGTGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAg                                              <  1:787331/150‑1 (MQ=255)
                                                                                                              ccATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGt                                      >  2:349977/1‑150 (MQ=255)
                                                                                                                aTGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAg                                    >  1:563188/1‑150 (MQ=255)
                                                                                                                aTGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAg                                    <  2:563188/150‑1 (MQ=255)
                                                                                                                aTGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAg                                    >  1:385371/1‑150 (MQ=255)
                                                                                                                  ggCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACa                                                     >  1:211374/1‑131 (MQ=255)
                                                                                                                  ggCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACa                                                     <  2:211374/131‑1 (MQ=255)
                                                                                                                  ggCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGc                                  <  2:618858/150‑1 (MQ=255)
                                                                                                                          ccAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTgca                          >  1:4941/1‑150 (MQ=255)
                                                                                                                          ccAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTgca                          <  2:134655/150‑1 (MQ=255)
                                                                                                                              ggcggcGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCaa                      <  2:385371/150‑1 (MQ=255)
                                                                                                                              ggcggcGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCaa                      <  1:26225/150‑1 (MQ=255)
                                                                                                                                       cagcagCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGa             <  2:436419/150‑1 (MQ=255)
                                                                                                                                          cagcaCCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGc                                                <  2:642736/112‑1 (MQ=255)
                                                                                                                                          cagcaCCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGc                                                >  1:642736/1‑112 (MQ=255)
                                                                                                                                          cagcaCCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTa          >  1:126402/1‑150 (MQ=255)
                                                                                                                                                 ccGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctgga                                          <  1:176569‑M2/111‑73 (MQ=255)
                                                                                                                                                 ccGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctgga                                          >  2:176569‑M2/1‑39 (MQ=255)
                                                                                                                                                  cggcggCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctggatgccaccctgaccggattcag                     <  2:575845‑M2/131‑94 (MQ=255)
                                                                                                                                                  cggcggCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGAcggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctggatgccaccctgaccggattcag                     >  1:575845‑M2/1‑38 (MQ=255)
                                                                                                                                                  cggcggCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTAGAGCTTTa  >  1:681196/1‑150 (MQ=255)
                                                                                                                                                  cGtctgccacgcccggcactgctcacaggcctggccgccggggtgctgctgagcgccgccctgggcgcggccatggccaactggaccgatgccgccctgccctggctggatgccaccctgaccggattcagcctggtcgcgcaactgtgg  >  2:626287‑M1/1‑2 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CCACAGTGGCCAGCACTGCAGGCGTTTCTGCGCCATCCACAGTTGCGCGACCAGGCTGAATCCGGTCAGGGTGGCATCCAGCCAGGGCAGGGCGGCATCGGTCCAGTTGGCCATGGCCGCGCCCAGGGCGGCGCTCAGCAGCACCCCGGCGGCCAGGCCTGTGAGCAGTGCCGGGCGTGGCAGACGGGAGACCTGGCGGGCGTCTTCAGCGTGGTCGGGGCGCTTCCATTGCCACCAGCCGTACAGTTGCAGGATGGCGTAGGCCACTTGCAGCAACATGCCCGAGTAGAGCTTTA  >  NC_002947/3262306‑3262601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.