New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6014745 =	23 (0.730)	4 (0.130)	4/236	NT	14.6%	coding (1076/1860 nt)	PP_5266	acetyl‑CoA hydrolase family protein
	?	NC_002947	6014776 =	25 (0.830)					coding (1045/1860 nt)	PP_5266	acetyl‑CoA hydrolase family protein

GTCTTCCAGCTGGTCGGCCACCCCGGCGCCGAGCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAA  >  NC_002947/6014600‑6014893                                                                                                                                                  |                                                                                                                                                     gTCTTCCAGCTGGTCGGCCACCCCGGCGCCGAGCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTgcgc                                                                                                                                                  >  2:27173/1‑150 (MQ=255)  acggcttgtacggctgcagcgggatgttcgtcaacggcctgcgggtgctggccgaagcagggctgctacgacgcccggcggacgagcagggcgcaatactgcattgcggcttttttcttggcccgcaagcgttctaccagcgcttgcgcc                                                                                                                                                 <  2:508724‑M1/6‑2 (MQ=255)      ccAGCTGGTCGGCCACCCCGGCGCCGAGCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCgct                                                                                                                                             <  2:160666/150‑1 (MQ=255)               cGGCCACCCCGGCGCCGAGCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCg                                                                                                                                    <  1:671546/150‑1 (MQ=255)               cGGCCACCCCGGCGCCGAGCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCg                                                                                                                                    <  2:484269/150‑1 (MQ=255)                ggCCACCCCGGCGCCGAGCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATCCGGGTCATCACAAACTGCGCGCGCTGCTCCAGCgg                                                                                                                                   <  1:236714/150‑1 (MQ=255)                                 gCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCt                                                                                                                  <  2:376343/150‑1 (MQ=255)                                                      tgtTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCga                                                                                             <  1:601887/150‑1 (MQ=255)                                                        aagcagggctgctacgacgcccggcggacgagcagggcgcaatactgcatggcggcttttttctcggcccgcaagcgttctaccagcgctTGCGCGCGCTGCTCCAGCGGCATCTCGCGCaa                                                                                                                       >  2:96312‑M1/91‑122 (MQ=255)                                                        aagcagggctgctacgacgcccggcggacgagcagggcgcaatactgcatggcggcttttttctcggcccgcaagcgttctaccagcgctTGCGCGCGCTGCTCCAGCGGCATCTCGCGCaa                                                                                                                       <  1:96312‑M1/32‑1 (MQ=255)                                                                    gcATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCa                                                                               >  2:679154/1‑150 (MQ=255)                                                                                tGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGTAGTATTgcg                                                                   <  1:27173/150‑1 (MQ=255)                                                                                tGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTgcg                                                                   <  1:679154/150‑1 (MQ=255)                                                                                  tCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGcc                                                                 >  2:788295/1‑150 (MQ=255)                                                                                    ggCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTGGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCt                                                               >  1:732717/1‑150 (MQ=255)                                                                                    ggCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCt                                                               >  2:787593/1‑150 (MQ=255)                                                                                           gAGTGCCTCCTGCCCGTAGAGCTCGTCGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCCTCTCGCGCAAGCGCTGGCAGAACGCTTGCGGGCCGAGAAAACCGCCGCCATGCAGTATTCCGCCCCGCTCGTc                                                        >  2:536293/1‑150 (MQ=255)                                                                                             gTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTccg                                                      >  2:333654/1‑150 (MQ=255)                                                                                              tGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTccgc                                                     <  2:483804/150‑1 (MQ=255)                                                                                                      gCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGcgtc                                             <  1:787593/150‑1 (MQ=255)                                                                                                          gTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTag                                         >  2:532825/1‑150 (MQ=255)                                                                                                                cTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGccc                                   >  2:20835/1‑150 (MQ=255)                                                                                                                   gTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTGGCGCAAGCGCTGGTAAAATGTTTGCGGGCCGAGCAAAACACGGCCGAACTGTAGTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGc                                >  1:57853/1‑150 (MQ=255)                                                                                                                   gTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAgcc                                                                                   >  2:419412/1‑99 (MQ=255)                                                                                                                   gTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAgcc                                                                                   <  1:419412/99‑1 (MQ=255)                                                                                                                       tcggcccgcaagcgttctaccagcgctTGCGCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCg                            <  2:681995‑M1/123‑1 (MQ=255)                                                                                                                       atgaAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCg                            >  2:774309/1‑150 (MQ=255)                                                                                                                         ggcccgcaagcgttctaccagcgctTGCGCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGc                          >  1:681995‑M1/26‑150 (MQ=255)                                                                                                                                aTACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGccagcacc                   >  2:833507/1‑150 (MQ=255)                                                                                                                                              aaaCTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTCTCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGAc     >  1:449873/1‑150 (MQ=255)                                                                                                                                                 cTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGaa  >  2:365223/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GTCTTCCAGCTGGTCGGCCACCCCGGCGCCGAGCAGGGTCATGCCAAACGCGGTGTTGATGAAGCGCGCATCACGACGTTGTCGGCGCTTGAGTGCCTCCTGCCCGTAGAGCTCGTTGATGAAGCTGATACGGGTCATGACAAACTGCGCGCGCTGCTCCAGCGGCATCTCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAA  >  NC_002947/6014600‑6014893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.