New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	100443 =	24 (0.760)	5 (0.180)	4/214	NT	18.6%	intergenic (‑35/+87)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein
	?	NC_002947	100525 =	23 (0.840)					intergenic (‑117/+5)	PP_0094/PP_0095	5'‑nucleotidase/hypothetical protein

GTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGC  >  NC_002947/100376‑100669                                                                                                                                                      |                                                                                                                                                  gTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTAGAGTGCTGCGTGGCCTTCTTCGCGGACATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAAt                                                                                                                                                   >  2:318633/1‑150 (MQ=255)  tCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATg                                                                                                                                                  >  1:365234/1‑150 (MQ=255)    gAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCg                                                                                                                                                <  2:430768/150‑1 (MQ=255)     aGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGTTAAAGCGCAGGCCTTGAAGGGGCCCCTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCgg                                                                                                                                               <  1:333764/150‑1 (MQ=255)          gAAGAGGATGTTTTTCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCAtt                                                                                                                                          >  1:686304/1‑150 (MQ=255)              agGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAgg                                                                                                                                      <  2:739051/150‑1 (MQ=255)                          tGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGcc                                                                                                                          >  2:641958/1‑150 (MQ=255)                            gTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCtt                                                                                                                        >  2:592560/1‑150 (MQ=255)                              gCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCg                                                                                                                      <  2:175490/150‑1 (MQ=255)                                    aCAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAgg                                                                                                                >  1:801930/1‑150 (MQ=255)                                       gggTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGc                                                                                                             <  2:365234/150‑1 (MQ=255)                                        ggTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCt                                                                                                            >  2:697534/1‑150 (MQ=255)                                                                cttcttCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGc                                                                                    >  2:58152/1‑150 (MQ=255)                                                                      cgcggacatgcccgcccccgcaggttgagtggccccttcaaggcctgcgctttacctgtgggagcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGgcgc                                                                              >  1:823597‑M2/81‑150 (MQ=255)                                                                       GCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGATGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGTTCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCt                                                                             <  1:814899‑M1/150‑1 (MQ=255)                                                                           GCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAg                                                                         >  1:58152‑M1/1‑150 (MQ=255)                                                                             ctgcccgcccccgcaggttgagtggccccttcaaggcctgcgctttacctgtgggagcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTAGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGga                                                                       <  2:379761‑M2/77‑1 (MQ=255)                                                                             ATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGga                                                                       <  1:72262‑M1/150‑1 (MQ=255)                                                                               gcccgcccccgcaggttgagtggccccttcaaggcctgcgctttacctgtgggagcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGgaga                                                                     >  2:467992‑M2/72‑150 (MQ=255)                                                                                agggcccccgcaggttgagtggccccttcaaggcctgcgctttacctgtgggagcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAggagag                                                                    >  1:379761‑M2/71‑149 (MQ=255)                                                                                 CCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCg                                                                                                                      >  1:569619‑M1/1‑99 (MQ=255)                                                                                 CCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCg                                                                                                                      <  2:569619‑M1/99‑1 (MQ=255)                                                                                    CTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAAt                                                                >  2:686304‑M1/1‑150 (MQ=255)                                                                                      cccgcaggttgagtggccccttcaaggcctgcgctttacctgtgggagcgggcatgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATgc                                                              <  2:823597‑M2/86‑1 (MQ=255)                                                                                             gTAAGGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTcc                                                       >  1:519570/1‑150 (MQ=255)                                                                                             gTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTcc                                                       >  1:843150/1‑150 (MQ=255)                                                                                              tAAAGCGCATGCCTTGAAGTGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGaa                                                                    >  2:653311/1‑136 (MQ=255)                                                                                              tAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGaa                                                                    <  1:653311/136‑1 (MQ=255)                                                                                                aaGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTg                                                    <  1:315622/150‑1 (MQ=255)                                                                                                  gcgcAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTc                                                  >  2:395707/1‑150 (MQ=255)                                                                                                       ggCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTca                                             <  2:519570/150‑1 (MQ=255)                                                                                                               aGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCgg                                    <  2:843150/150‑1 (MQ=255)                                                                                                                 gggCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCGGGc                                  <  1:641958/150‑1 (MQ=255)                                                                                                                   gCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCtt                                                                                                     <  2:233983/82‑1 (MQ=255)                                                                                                                   gCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCtt                                                                                                     >  1:233983/1‑82 (MQ=255)                                                                                                                      aCTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCtt                                                                                                     >  2:316369/1‑79 (MQ=255)                                                                                                                      aCTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCtt                                                                                                     <  1:316369/79‑1 (MQ=255)                                                                                                                           aCCTGCGGGGGCGGGACTGCCCGCGAATGCGGTCATTCAGCTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCGGGCCTGTTTCAcc                        <  1:338481/150‑1 (MQ=255)                                                                                                                                        ggcatgcccgcgaaTGCGGTCATTGAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTCCGCTTCACGTAGTTGCCCGAGCTGTAGGAGAAAAATGCTCTCTCCTTGTCGTGCAG‑CCGCCGGGCCTGTTTCACCGGACTGCCCATGt           >  2:97159‑M2/15‑150 (MQ=255)                                                                                                                                            tgcccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAg       <  1:395707‑M2/140‑1 (MQ=255)                                                                                                                                               ccgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGGGGAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTa    >  1:390001‑M2/8‑150 (MQ=255)                                                                                                                                                cgcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCAGCGCTGTAGGAGAAAAATGCGCCCTACTTGTCG‑TCAGACCGCAGGGCCGGTTTGACGGGACTGCCCATGTACAGGTAg   >  2:269596‑M2/7‑150 (MQ=255)                                                                                                                                                 gcgaaTGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGc  <  1:592560‑M2/145‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                  GTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTAAAGCGCAGGCCTTGAAGGGGCCACTCAACCTGCGGGGGCGGGCATGCCCGCGAATGCGGTCATTCAGGTTGATCGTAGCCTTCGGCCAGGTGCTGGTCCTTGAGCTTCACGTAGTTGCCGGCGCTGTAGGAGAAAAATGCGCGCTCCTTGTCGTTCAG‑CAGCCGGGCCTGTTTCACCGGACTGCCCATGTACAGGTAGC  >  NC_002947/100376‑100669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.