New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 958597 =36 (1.140)3 (0.100) 3/240 NT 7.8% coding (49/564 nt) PP_0820 acetyltransferase
?NC_002947 958648 = 36 (1.170)coding (100/564 nt) PP_0820 acetyltransferase

TTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAATGGCGACCAGCTCAAGCTTGGCATGTACCGCCGCGACAACGGCGA  >  NC_002947/958503‑958796
                                                                                                                                                 |                                                                                                                                                    
ttGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCGACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGGCATGCCGATGCCGCTCAGTGGCTGGCGATCAt                                                                                                                                                  >  2:471622/1‑150 (MQ=255)
ttGACGTTAAACTGTCATCTCCACAGAAATGGACAGGAGGTCCGGCGTGACCCCACCCAGCAGTTTCCGCGGTTTGCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCAt                                                                                                                                                  <  1:362919/150‑1 (MQ=255)
 tGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATg                                                                                                                                                 <  1:817924/150‑1 (MQ=255)
 tGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATg                                                                                                                                                 <  1:238131/150‑1 (MQ=255)
  tcgcggtcggcggccagggcgctttcggcctcggccaggtcttgccagggtgcatggtgccaatagcgcatgacctcggggtcggccatgatCGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATgg                                                                                                                                                >  1:215039‑M1/93‑150 (MQ=255)
     gTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGcc                                                                                                                                              >  2:343340/1‑149 (MQ=255)
     gTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGcc                                                                                                                                              <  1:343340/149‑1 (MQ=255)
            tGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGAt                                                                                                                                                     >  2:504058/1‑135 (MQ=255)
            tGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGAt                                                                                                                                                     <  1:504058/135‑1 (MQ=255)
            tGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGAcccc                                                                                                                                        <  1:434559/148‑1 (MQ=255)
            tGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGAcccc                                                                                                                                        >  2:434559/1‑148 (MQ=255)
                 tctcCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCACAGTGGCTGGCGATCATGGCCGACCCCGAGGTcg                                                                                                                                 >  1:817234/1‑149 (MQ=255)
                     cccAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATgcg                                                                                                                             >  1:34486/1‑150 (MQ=255)
                             tGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGc                                                                                                                     <  1:756039/150‑1 (MQ=255)
                               gACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCAc                                                                                                                   >  1:244774/1‑150 (MQ=255)
                                    gagaTCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGc                                                                                                              >  1:54669/1‑150 (MQ=255)
                                     agaTCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCa                                                                                                             <  1:729984/150‑1 (MQ=255)
                                               cagggtgcatggtgccaatagcgcatgacctcggggtcggccatgatCGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGcc                                                                                                                                              <  2:804935‑M1/60‑1 (MQ=255)
                                               cagggtgcatggtgccaatagcgcatgacctcggggtcggccatgatCGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGcc                                                                                                                                              >  1:804935‑M1/48‑107 (MQ=255)
                                                   cccaccccGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCt                                                                                               >  2:678426/1‑150 (MQ=255)
                                                    ccaccccGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTg                                                                                              >  1:575370/1‑150 (MQ=255)
                                                          cGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTggccgag                                                                                        >  1:400568/1‑150 (MQ=255)
                                                           gCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAGACCTggccgaggc                                                                                      >  2:681663/1‑150 (MQ=255)
                                                                   cccAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAgc                                                                               <  2:54669/150‑1 (MQ=255)
                                                                      aGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGACCGACCCCGAGGTCATGCGCGATTGGGACCATTCACCCGAGCAAGGCCTGGCCGAGGCCGAAAGCGcc                                                                            >  1:346752/1‑150 (MQ=255)
                                                                          aCCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGaaa                                                                                 >  1:731339/1‑141 (MQ=255)
                                                                          aCCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGaaa                                                                                 <  2:731339/141‑1 (MQ=255)
                                                                            ctctGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCCAGCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGgcc                                                                      <  1:362680/150‑1 (MQ=255)
                                                                                     ggccatgatcgccagccactgcgcggcatcggcatggcgcatggggcgcagttgcaggcgATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTg                                                                                                        <  2:804935‑M2/47‑1 (MQ=255)
                                                                                     ggccatgatcgccagccactgcgcggcatcggcatggcgcatggggcgcagttgcaggcgATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTg                                                                                                        >  1:804935‑M2/61‑107 (MQ=255)
                                                                                       ctgCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGa                                                           <  1:187984/148‑1 (MQ=255)
                                                                                       ccatgatcgccagccactgcgcggcatcggcatggcgcatggggcgcagttgcaggcgATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGa                                                           >  1:215039‑M2/59‑150 (MQ=255)
                                                                                         gCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAg                                                         <  2:400568/150‑1 (MQ=255)
                                                                                          cccACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGc                                                        <  1:672379/150‑1 (MQ=255)
                                                                                          cccACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGc                                                        >  1:637911/1‑150 (MQ=255)
                                                                                          cccACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCCAGGTCATGCGCTATTGGGACACTGCGCCAGACCAAGACCATGCCTATGCCGAAAGCGCCCTTGCCGCCGACCGCGaaag                                                        >  2:187984/1‑148 (MQ=255)
                                                                                            cACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCt                                                      >  1:649100/1‑150 (MQ=255)
                                                                                             aCGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTa                                                     <  2:575370/150‑1 (MQ=255)
                                                                                                  tGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTTCGAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGTCTATGCCa                                                >  1:9009/1‑150 (MQ=255)
                                                                                                   gCAACTGCGCCCCCTGCGCCCTGCCGCTGCCGCGCATTGGCTTGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCaa                                               <  2:649100/150‑1 (MQ=255)
                                                                                                     aaCTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAATg                                             >  1:111704/1‑150 (MQ=255)
                                                                                                     aaCTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAATg                                             >  1:389496/1‑150 (MQ=255)
                                                                                                           gcCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAATGGCGAcc                                       >  1:248046/1‑150 (MQ=255)
                                                                                                              ccATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAAt                                              <  2:647591/140‑1 (MQ=255)
                                                                                                              ccATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAAt                                              >  1:647591/1‑140 (MQ=255)
                                                                                                                            gatgccgCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAATGGCGACCAGCTCAAGCTTGGCATg                      >  1:98014/1‑150 (MQ=255)
                                                                                                                                                gATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAATGGCGACCAGCTCAAGCTTGGCATGTACCGCCGCGACAACGGCGa  >  2:179953‑M2/2‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
TTGACGTTAAACTGTCATCTCCCCAGCAATGGACAGGAGATCCGGCGTGACCCCACCCCGCAGTTTCCCCAGTGACCTCTGCCTCGACAGCCCACGCCTGCAACTGCGCCCCATGCGCCATGCCGATGCCGCGCAGTGGCTGGCGATCATGGCCGACCCCGAGGTCATGCGCTATTGGCACCATGCACCCTGGCAAGACCTGGCCGAGGCCGAAAGCGCCCTGGCCGCCGACCGCGAAGCCTATGCCAATGGCGACCAGCTCAAGCTTGGCATGTACCGCCGCGACAACGGCGA  >  NC_002947/958503‑958796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.